Pairwise Alignments

Query, 255 a.a., dihydroorotate dehydrogenase electron transfer subunit from Methanococcus maripaludis S2

Subject, 366 a.a., ferredoxin from Pseudomonas simiae WCS417

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 37/220 (16%)

Query: 8   KIIDVIDESPTVKTFLLDNE----FDFKPGQFAMVWIPEIDEKP----FGFSSKNSI--- 56
           + + VI E+  V+TF    +    F FKPGQF  + + EID +P    +  SS  S+   
Sbjct: 22  RCVKVIQETWDVRTFCFMADQPILFFFKPGQFVTLEL-EIDGQPIMRSYTISSSPSVPYS 80

Query: 57  ---SIAKV--GKFTEKIH-SLKKGDLLGIRGPYG--NNFECIGTKILAVAGGIGSAPVIS 108
              +I +V  GK +  +H +L +G  L + GP G  N  +    K+L ++GG+G  PV+S
Sbjct: 81  FSVTIKRVPGGKVSNWLHDTLHEGQELAVHGPVGLFNAIDFPSPKVLYLSGGVGITPVMS 140

Query: 109 AVEAF--SKLGVEITSVIGGRTKDELLFLDRFEKCGK---TFACTDDCS--------FGF 155
               F  +   V++T +   R+  ++++    E        F+    C          G+
Sbjct: 141 MARWFYDTNANVDMTFIHSARSPKDIIYHRELEHMASRIDNFSLHLICEKHGLGEPWAGY 200

Query: 156 GGFTTEKMLELLLEEKFDM-VITCGPEIMM---KKVVEIA 191
            G+   KMLEL++ +  +  V  CGP   M   K+++E+A
Sbjct: 201 RGYLNHKMLELMVPDFLEREVFCCGPTPYMNAVKRLLEVA 240



 Score = 24.6 bits (52), Expect = 0.003
 Identities = 8/11 (72%), Positives = 9/11 (81%)

Query: 208 CGIGICGQCAV 218
           CG+GICG C V
Sbjct: 316 CGMGICGTCKV 326