Pairwise Alignments

Query, 255 a.a., dihydroorotate dehydrogenase electron transfer subunit from Methanococcus maripaludis S2

Subject, 368 a.a., putative glycine-betaine dioxygenase subunit from Pseudomonas putida KT2440

 Score = 53.9 bits (128), Expect = 5e-12
 Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 34/218 (15%)

Query: 8   KIIDVIDESPTVKTFLLDNE----FDFKPGQFAMVWIPEIDEKP----FGFSSKNS---- 55
           + + VI E+  V+TF    +    F FKPGQF  + + EI+ KP    +  SS  S    
Sbjct: 24  RCVKVIQETWDVRTFCFMADQPIMFFFKPGQFVTLEL-EIEGKPVMRSYTISSSPSVPYS 82

Query: 56  --ISIAKV--GKFTEKIH-SLKKGDLLGIRGPYG--NNFECIGTKILAVAGGIGSAPVIS 108
             I++ +V  G  +  +H ++ +G  L + GP G  N  +    K+L ++GG+G  PV+S
Sbjct: 83  FSITVKRVPGGLVSNFLHDTMHEGAELPVHGPVGLFNAIDFPAGKVLYLSGGVGITPVMS 142

Query: 109 AVEAF--SKLGVEITSVIGGRTKDELLFLDRFEKCGK---TFACTDDCS--------FGF 155
               F  +   V++  V   R+  ++++    E+       F+    C          G+
Sbjct: 143 MARWFYDTNANVDMVFVHSARSPKDIIYHRELEQMASRIPNFSLHIICEKHGLGEPWAGY 202

Query: 156 GGFTTEKMLELLLEEKFDMVI-TCGPEIMMKKVVEIAE 192
            G+  ++++EL+  +  + V+  CGP   M  V  + E
Sbjct: 203 RGYLNQRLMELIAPDYMERVVFCCGPTPYMTAVKRMLE 240



 Score = 24.6 bits (52), Expect = 0.003
 Identities = 8/11 (72%), Positives = 9/11 (81%)

Query: 208 CGIGICGQCAV 218
           CG+GICG C V
Sbjct: 318 CGMGICGTCKV 328