Pairwise Alignments

Query, 255 a.a., dihydroorotate dehydrogenase electron transfer subunit from Methanococcus maripaludis S2

Subject, 407 a.a., NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit from Enterobacter asburiae PDN3

 Score = 43.5 bits (101), Expect = 7e-09
 Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 25/154 (16%)

Query: 59  AKVGKFTEKIHSLKKGDLLGIRGPYGNNF-ECIGTKILAVAGGIGSAPVISAV-EAFSKL 116
           A  G  +  I SLK GD + I GP+G  F +    +++ + GG G AP+ S + +   +L
Sbjct: 239 APPGVMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRL 298

Query: 117 GVE--ITSVIGGRTKDELLFLDRFEKCGK-----TFACT------DDCSFGFGGFTTEKM 163
           G +  I+   G R+  E+ + D FE+  +     TF         +D   G+ GF    +
Sbjct: 299 GSQRKISFWYGARSLREMFYEDEFEQLARENPNFTFHVALSDPQPEDNWTGYTGFIHNVL 358

Query: 164 LELLLEE-------KFDMVITCGPEIMMKKVVEI 190
            E  L++       +F M   CGP +M   V+++
Sbjct: 359 YENYLKQHPAPEDCEFYM---CGPPMMNAAVIKM 389