Pairwise Alignments

Query, 255 a.a., dihydroorotate dehydrogenase electron transfer subunit from Methanococcus maripaludis S2

Subject, 335 a.a., naphthalene 1,2-dioxygenase from Agrobacterium fabrum C58

 Score = 56.6 bits (135), Expect = 6e-13
 Identities = 45/148 (30%), Positives = 74/148 (50%), Gaps = 13/148 (8%)

Query: 5   VMCKIIDVIDESPTVKTFLLDN-EFDFKPGQFAMVWIPEIDEKPFGFSSKNSISIAKV-- 61
           V+ + +D   +   ++  L D  +F FKPGQ+  +  P+   + +  +S+    + +   
Sbjct: 108 VVEEAVDATHDIKLIRIRLEDRAQFTFKPGQYVRLLYPDSSPRDYSIASRVDEELIEFHI 167

Query: 62  -----GKFTEKIHSLKK-GDLLGIRGPYGNNF--ECIGTKILAVAGGIGSAPVISAVEAF 113
                G  + +I SL + GD + I GP+G++F  E     IL +AGG G APV + VEA 
Sbjct: 168 RHVPGGMTSGRIFSLARAGDPVTIVGPFGSSFLREKHCGPILGIAGGSGLAPVKAVVEAA 227

Query: 114 SKLGVE--ITSVIGGRTKDELLFLDRFE 139
              G E  +    G R + +L  LDRF+
Sbjct: 228 LATGRERPVHVYFGARAERDLYMLDRFQ 255