Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 285 a.a., Diaminopimelate epimerase from Xanthobacter sp. DMC5

 Score =  164 bits (416), Expect = 2e-45
 Identities = 101/276 (36%), Positives = 145/276 (52%), Gaps = 11/276 (3%)

Query: 3   FTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLILP--SDVADFKMRM 60
           F KM+GLGN+ + +D  +  +E P   ++ ++          +VL  P  +D A F +R+
Sbjct: 9   FVKMNGLGNEILVLDLRADPVEVPPAAARALARPSVLPFDQAMVLYPPRRADTAAF-VRI 67

Query: 61  FNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIE-NGKVVLVKVD 119
            N+DGS +  CGN  RC+     + + T    I  E+ AG+  L+ T+  +G+V   KVD
Sbjct: 68  LNNDGSISAACGNGTRCIAAL--EAERTGTPHILFESEAGL--LDCTVRPDGQV---KVD 120

Query: 120 MGEPILKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPLEKIG 179
           MG P L   +IP+  +        + + +       VSMGNPHAI ++ + D   +E +G
Sbjct: 121 MGAPRLGWRDIPLAHDVGDTASVLVPSFENLGPAVTVSMGNPHAIFFVSDADAMDVEGLG 180

Query: 180 PLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYVGR 239
              E H  FP + N+ F  L   + + + VWERGAG T ACGT ACA   A+V  G  GR
Sbjct: 181 AALEHHPLFPERANISFASLTAPDRILLHVWERGAGRTRACGTAACATGVAAVRTGRTGR 240

Query: 240 KATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEI 275
             TV L GG L IEW E D H+ MTGP    F G +
Sbjct: 241 AVTVTLPGGPLEIEWRESDGHVLMTGPVEHEFAGTL 276