Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 276 a.a., diaminopimelate epimerase from Pseudomonas simiae WCS417

 Score =  220 bits (561), Expect = 2e-62
 Identities = 112/277 (40%), Positives = 170/277 (61%), Gaps = 7/277 (2%)

Query: 1   MKFTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLI-LPSDV-ADFKM 58
           ++FTKMHGLGND++ +D +SQ      + +K   DRH GIG D L+++  PS+   DF+ 
Sbjct: 3   LRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPEVDFRY 62

Query: 59  RMFNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKV 118
           R+FN+DGSE E CGN  RC  +FV DK++T K  I +ET +G+  L++  +      + V
Sbjct: 63  RIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGVIELDIRSDGQ----ISV 118

Query: 119 DMGEPILKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPLEKI 178
           +MG P L   +IP  + +       +           VSMGNPHA+  + +++  P+ ++
Sbjct: 119 NMGAPRLVPADIPFQAPEQAA-SYALDVDGKTVEIAAVSMGNPHAVLRVNDINNAPVHEL 177

Query: 179 GPLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYVG 238
           GP  E H +FP + NV F+++ID+   ++RVWERGAGET ACGTGACA   A++ +G++ 
Sbjct: 178 GPKIEHHPRFPARVNVGFLQVIDRTRAQLRVWERGAGETQACGTGACAAAVAAISQGWMD 237

Query: 239 RKATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEI 275
               + L GG L+IEW      + MTGPA+ V+EG++
Sbjct: 238 SPLLIDLPGGRLSIEWAGPGHPVMMTGPASRVYEGQV 274