Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 267 a.a., diaminopimelate epimerase from Pseudomonas simiae WCS417

 Score =  134 bits (338), Expect = 2e-36
 Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 13/273 (4%)

Query: 1   MKFTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLILPSDVADFKMRM 60
           + F KMH  G+D+I +D          ++++ + +RH GIG + L ++L  D A  +++ 
Sbjct: 3   LPFVKMHAHGDDFIIIDRRGLHDPITAKVARQLGNRHTGIGFNQLAVLLDCDDAAARIKF 62

Query: 61  FNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKVDM 120
           +N +G+    CG+A R V   +  +  TD  ++ + T  G+    +T        + V+M
Sbjct: 63  WNPNGTLLATCGSATRGVADRLMHEAGTD--SVVLRTDRGL----LTCARAAGRQISVNM 116

Query: 121 GEPILKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPLEKIGP 180
           GEP L    +P L+E    +   I       N    SMGNPH   ++E++    +  +GP
Sbjct: 117 GEPSLDWSAVP-LAEAMDTLTLPIDG-----NPAACSMGNPHCTFFVEDLTAVDVATVGP 170

Query: 181 LFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYVGRK 240
             EIH  FP KTNV FV+++D+  +++R+WERG G  L  G+  C  +   + +G +   
Sbjct: 171 ALEIHPLFPAKTNVHFVQVLDRGHIRLRIWERGGGVPLGSGSCCCGAVVNGIRRGLLDAT 230

Query: 241 ATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEG 273
             V   GG +T+ W   +  + +TG    V +G
Sbjct: 231 VQVHCDGGTVTVHW-AGEGAVVLTGSVEPVMQG 262