Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 270 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Sphingobium sp. HT1-2

 Score =  186 bits (473), Expect = 4e-52
 Identities = 111/279 (39%), Positives = 158/279 (56%), Gaps = 20/279 (7%)

Query: 2   KFTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLILPS---DVADFKM 58
           +F+KMHGLGND++ +DA    +      ++ ++DRH GIG D L++I  +   D AD  M
Sbjct: 4   RFSKMHGLGNDFVVIDARQAPVAMTEARARAIADRHAGIGCDQLIVIGDAEAGDQADVSM 63

Query: 59  RMFNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKV 118
            +FNSDGSE E CGNA RCV  FV          + I T AG+   +  ++ G      V
Sbjct: 64  LIFNSDGSEVEACGNATRCVPLFV-------GKDVLIRTRAGLLDAK-GVDGG----ASV 111

Query: 119 DMGEPILKAEEIPVLSEKHPVIDEEITAK-DYCYNFTCVSMGNPHAITYIENVDEFPLEK 177
           DMG P    + IP+    +P+    ++A  +       V++GNPH I ++E++D    E+
Sbjct: 112 DMGAPRFDWDAIPLA---YPMDTLTMSASWEDLPAPAAVNVGNPHVIFFVEDLDAVDFER 168

Query: 178 IGPLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYV 237
           +GPL E    FP + NV F +++    +++ VWERGAG T ACGTGACA   A++ +  +
Sbjct: 169 LGPLIEHDPLFPARVNVNFAQVVGPQHLRLIVWERGAGLTRACGTGACATAVAAIRRKLM 228

Query: 238 GRKATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEID 276
               TV L GGDL I+W      I MTGPAT VF+GE D
Sbjct: 229 AGPVTVSLPGGDLEIDWAP-GSTIRMTGPATHVFDGEAD 266