Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 276 a.a., Diaminopimelate epimerase from Pseudomonas sp. RS175

 Score =  224 bits (571), Expect = 2e-63
 Identities = 115/277 (41%), Positives = 173/277 (62%), Gaps = 7/277 (2%)

Query: 1   MKFTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLI-LPSDV-ADFKM 58
           ++FTKMHGLGND++ +D +SQ      + +K   DRH GIG D L+++  P++   DF+ 
Sbjct: 3   LRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPTNPDVDFRY 62

Query: 59  RMFNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKV 118
           R+FN+DGSE E CGN  RC  +FV DK++T K  I +ET +GI  +E+ + N   +   V
Sbjct: 63  RIFNADGSEVEQCGNGARCFARFVLDKRLTAKRRIRVETKSGI--IELDVRNDGQI--GV 118

Query: 119 DMGEPILKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPLEKI 178
           +MG P LK  EIP  +     +   +           VSMGNPHA+  + +++  P+ ++
Sbjct: 119 NMGAPRLKPSEIPFEAPAQ-ALSYPLEVDGATVELAAVSMGNPHAVLRVTDINSAPVHEL 177

Query: 179 GPLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLKGYVG 238
           GP  E H +FP + NV F+++ID++  ++RVWERGAGET ACGTGACA   A++ +G++ 
Sbjct: 178 GPKIEHHPRFPARVNVGFLQVIDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMD 237

Query: 239 RKATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEI 275
               + L GG L+IEW    + + MTGPA  V+EG++
Sbjct: 238 SPLLIDLPGGRLSIEWAGPGQPVMMTGPAVRVYEGQV 274