Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 284 a.a., diaminopimelate epimerase from Magnetospirillum magneticum AMB-1

 Score =  180 bits (456), Expect = 4e-50
 Identities = 109/281 (38%), Positives = 160/281 (56%), Gaps = 16/281 (5%)

Query: 3   FTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLILPSD--VADFKMRM 60
           F KMHGLGND++ +DA ++ ++   E  + ++ R  G+G D LV++  +    AD  M +
Sbjct: 8   FLKMHGLGNDFVVLDARARALDLTPERVRAIASRGTGVGCDQLVVMTQATDPCADATMLI 67

Query: 61  FNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKVDM 120
           +N+DGSE   CGNA RCV   +  +   DK  +  +T AG+    +  E+     V VDM
Sbjct: 68  YNADGSEVAACGNASRCVAWLLMKEIAADK--VVFQTKAGL----LDAESRGPHQVAVDM 121

Query: 121 GEPILKAEEIPVLSEKHPVIDEEITAKDYCYNFTCVSMGNPHAITYIENVDEFPLEKIGP 180
           G   L   EIP L+E    +   I+A     +   VSMGNPHA+ ++++ +   L ++G 
Sbjct: 122 GPARLDWREIP-LAEAVDTLHLGISAGPLA-DPVGVSMGNPHAVFFVDDAEAVNLAQLGR 179

Query: 181 LFEIHEKFPRKTNVEFVELI-----DKNTVKMRVWERGAGETLACGTGACAVLTASVLKG 235
             E H  FP + N+E  +++     +   ++MRVWERGAG T+ACGTGACA L A+  +G
Sbjct: 180 GLEHHALFPERANIEVAQVLTPPDAEMGRIRMRVWERGAGITMACGTGACATLVAAARRG 239

Query: 236 YVGRKATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEID 276
              RKA + L GG LTIEW + D H+ MTGP    F G +D
Sbjct: 240 LSPRKAEIILDGGTLTIEWLK-DGHVLMTGPVAVAFTGTLD 279