Pairwise Alignments

Query, 277 a.a., diaminopimelate epimerase from Methanococcus maripaludis S2

Subject, 274 a.a., diaminopimelate epimerase from Serratia liquefaciens MT49

 Score =  213 bits (543), Expect = 3e-60
 Identities = 112/283 (39%), Positives = 172/283 (60%), Gaps = 15/283 (5%)

Query: 1   MKFTKMHGLGNDYIYVDAISQKIENPNEISKFVSDRHFGIGSDGLVLILP--SDVADFKM 58
           M+F+KMHGLGND++ VDA++Q +    E+ + ++DRH G+G D L+++ P      DF  
Sbjct: 1   MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHY 60

Query: 59  RMFNSDGSEAEMCGNAIRCVGKFVYDKKMTDKSTITIETLAGIKVLEMTIENGKVVLVKV 118
           R+FN+DGSE   CGN  RC  +FV  K +T+K  I + T  G  VL +T ++    LV V
Sbjct: 61  RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDD----LVCV 116

Query: 119 DMGEPILKAEEIPVLSEKHPVIDEEIT----AKDYCYNFTCVSMGNPHAITYIENVDEFP 174
           +MGEP    + +P  + K     EE T    A ++      VSMGNPH +  +++V    
Sbjct: 117 NMGEPNFDPQAVPFRATK-----EEKTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAK 171

Query: 175 LEKIGPLFEIHEKFPRKTNVEFVELIDKNTVKMRVWERGAGETLACGTGACAVLTASVLK 234
           +E +GP+ E HE+FP + N+ F++++ +  +K+RV+ERGAGET ACG+GACA +   + +
Sbjct: 172 VELLGPVLEGHERFPERANIGFMQIVSREHIKLRVYERGAGETQACGSGACAAVAVGIQQ 231

Query: 235 GYVGRKATVKLLGGDLTIEWNEFDKHIYMTGPATTVFEGEIDI 277
             +  +  V+L GG L I W      ++MTGPAT V++G I +
Sbjct: 232 ELLSEEVHVELPGGSLHIRWKGPGSPLFMTGPATHVYDGFIHL 274