Pairwise Alignments

Query, 308 a.a., ribonuclease Z from Methanococcus maripaludis S2

Subject, 305 a.a., ribonuclease Z from Enterobacter asburiae PDN3

 Score =  175 bits (444), Expect = 1e-48
 Identities = 114/314 (36%), Positives = 167/314 (53%), Gaps = 16/314 (5%)

Query: 1   MKITFLGTGAAIPTKYRAHPSISLKFD----GEIFLFDCGENTQRQIIFTDVSPMKINNI 56
           M++ FLGT A +PT+ R   +I L       G ++LFDCGE TQ Q++ T   P K++ I
Sbjct: 1   MELIFLGTSAGVPTRSRNVTAILLDLKHPTRGGLWLFDCGEGTQHQLLHTAYHPGKLDKI 60

Query: 57  FITHLHGDHVLGLPGLLQSIAFQGRKKPLNIYGPAETVKMIEHILGVGYHSIDYPINVHE 116
           FITHLHGDH+ GLPGLL S +  G   PL IYGPA   + +E  L +     DYP+ V E
Sbjct: 61  FITHLHGDHLFGLPGLLCSRSMAGNANPLTIYGPAGIREFVETTLRLSGSWTDYPLEVVE 120

Query: 117 ISSKTPERIIFTN-NYEVFSYPVVHSVPALAYVFKQVKKP-RMDLEKVKKLGIEIGPDLK 174
           I+    E ++F + +Y V + P+ H V    Y      KP  +D   +   G++ GP  +
Sbjct: 121 IA----EGLVFDDGDYRVTAQPLNHPVECYGYRIDAHDKPGALDAAALMADGVKPGPLFQ 176

Query: 175 RLKDGFNVEL-NGEIITLNDVTLPPKKGICVGYSGDTIPLKEFAEFLKELKCNTLIHEAT 233
           RLK G  V L +G +I   D    P+ G  +   GDT P    A        + ++HEAT
Sbjct: 177 RLKHGETVTLEDGRVINGQDYLSAPQPGKKLAIFGDTAPCP--AALTLAQGVDVMVHEAT 234

Query: 234 FDKTMERNAKETLHSTATDALNIAKLSGVSTVLLTHISARYDNLNAFENEIVEFKAENPE 293
            +  ME  A    HS+   A  +A+ +GV  +++TH+S+RYD +    + + E +A  PE
Sbjct: 235 LETAMEEKANSRGHSSTRQAAQLARDAGVGRLIVTHVSSRYD-VRGCASLLAECRALFPE 293

Query: 294 IHVLIAEDLMEYSL 307
               +AED  + S+
Sbjct: 294 CE--LAEDFAQVSV 305