Pairwise Alignments

Query, 308 a.a., ribonuclease Z from Methanococcus maripaludis S2

Subject, 304 a.a., ribonuclease Z from Dickeya dianthicola ME23

 Score =  160 bits (405), Expect = 3e-44
 Identities = 97/279 (34%), Positives = 149/279 (53%), Gaps = 10/279 (3%)

Query: 1   MKITFLGTGAAIPTKYRAHPSISLKFDG---EIFLFDCGENTQRQIIFTDVSPMKINNIF 57
           M++ FLGT A +PTK R   SI+L   G     +LFDCGE TQ Q++ T V P K+  IF
Sbjct: 1   MELIFLGTNAGVPTKERNVTSIALDLHGIRPAFWLFDCGEGTQHQLLRTPVKPGKLEKIF 60

Query: 58  ITHLHGDHVLGLPGLLQSIAFQGRKKPLNIYGPAETVKMIEHILGVGYHSIDYPINVHEI 117
           ITHLHGDH+ GLPGLL S +  G + PL +YGPA     +E  L +    + YP+ V E+
Sbjct: 61  ITHLHGDHLFGLPGLLCSRSMAGIETPLTLYGPAGLKAFVEATLTLSGSWLTYPLEVVEV 120

Query: 118 SSKTPERIIFTNNYEVFSYPVVHSVPALAYVFKQVKKP-RMDLEKVKKLGIEIGPDLKRL 176
               P  +   + + V ++ + H++  + Y  ++  KP  +D++K+   G++ G   ++L
Sbjct: 121 ---VPGTVFEDHQFRVTAHELSHTLYCVGYRIEERPKPGPLDVDKLAAAGVKPGAYFQQL 177

Query: 177 KDGFNVEL-NGEIITLNDVTLPPKKGICVGYSGDTIPLKEFAEFLKELKCNTLIHEATFD 235
           K G  V L +G ++   D   P   G  +   GDT P  E  +    +  + ++HEAT +
Sbjct: 178 KRGETVTLDDGRVLNGWDYVGPGLPGKSLAIFGDTRPTPEALKLAAGV--DVMVHEATLE 235

Query: 236 KTMERNAKETLHSTATDALNIAKLSGVSTVLLTHISARY 274
             +   A    HST       A+ +G   +++TH SARY
Sbjct: 236 GALAERADARGHSTTLQTAATARDAGAKRLIITHFSARY 274