Pairwise Alignments

Query, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 89.0 bits (219), Expect = 9e-23
 Identities = 61/217 (28%), Positives = 108/217 (49%), Gaps = 29/217 (13%)

Query: 8   QKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSV 67
           + W + G  L N ++Y+EA++C+DK +S    +    + KG    KL EYEK++  +N  
Sbjct: 128 EAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKA 187

Query: 68  LNMNPSYIPAIKNKKQVEEKLKKQES--ENYNKFSKLGVEN-----YKQG------NFEK 114
           L ++     A+  K     KL+  ES  E +N    +  ++     YK        NFE 
Sbjct: 188 LLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYYKADAYRDTENFEY 247

Query: 115 SLSYFEKAFEINPYSETLRKNIETTRLKLKEI--------LPIR--------WNNKGVEY 158
           +L Y+++A EINP +  +  +      K+K          L I+        W  KG  Y
Sbjct: 248 ALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSY 307

Query: 159 YKVKNYQKALECFEKAVKLNPKFESALKNKTMVQKLI 195
             +K+Y+ ++ C++KA+++ PK E+A +N  +++K+I
Sbjct: 308 VGLKDYESSISCYKKALEIEPKNENAKENIDIIEKII 344



 Score = 77.8 bits (190), Expect = 2e-19
 Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 31/195 (15%)

Query: 1   MRNNYGIQKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKA 60
           + N    + W + G  L     Y E+ EC+DK L   P++  A  G G V  K   Y+KA
Sbjct: 53  LENPKSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLSKTGNYQKA 112

Query: 61  LQCFNSVLNMNPSYIPAIKNKKQVEEKLKKQ-------------ESENYNKFSKLGVENY 107
           L+ ++  LN++     A KNK      +++               ++N + +   G   +
Sbjct: 113 LEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQF 172

Query: 108 KQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKA 167
           K G +EKS+  + KA  I+       + +ET  L            KG  Y K++NY+ A
Sbjct: 173 KLGEYEKSIDSYNKALLID-------EKMETALL-----------GKGNSYLKLQNYESA 214

Query: 168 LECFEKAVKLNPKFE 182
           +ECF  A  +NPK E
Sbjct: 215 IECFNTAETINPKSE 229



 Score = 63.9 bits (154), Expect = 3e-15
 Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 39/185 (21%)

Query: 8   QKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSV 67
           + ++  G  L N   Y +++  Y+  L   P        KG   LKL  Y ++ +CF+  
Sbjct: 26  KSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKA 85

Query: 68  LNMNPSYIPAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINP 127
           L ++P                     EN   F+ LG    K GN++K+L  ++K+  I+ 
Sbjct: 86  LLIDP---------------------ENSEAFNGLGTVLSKTGNYQKALEMYDKSLNID- 123

Query: 128 YSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFESALKN 187
                 +N E             W NKG+    ++ Y +A++CF+K++ +N K      N
Sbjct: 124 -----SENSEA------------WKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYN 166

Query: 188 KTMVQ 192
           K   Q
Sbjct: 167 KGETQ 171



 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 19/114 (16%)

Query: 91  QESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKL------- 143
           Q+S++YN     G+E Y QGN+  S+S +  A   NP S  +  N   + LKL       
Sbjct: 23  QKSKSYND---KGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGEST 79

Query: 144 ----KEIL-----PIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFESALKNK 188
               K +L        +N  G    K  NYQKALE ++K++ ++ +   A KNK
Sbjct: 80  ECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEAWKNK 133