Pairwise Alignments

Query, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 798 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 40.4 bits (93), Expect = 9e-08
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 21/114 (18%)

Query: 14  GALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPS 73
           G  L +  +  +A E Y K+++  PD   A    G++F KL + ++A+  ++ VL ++P+
Sbjct: 247 GRALQDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPA 306

Query: 74  YIPAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINP 127
             PA  N+                     G   Y+ G  E +L  F  A  + P
Sbjct: 307 NGPAWLNR---------------------GKALYEAGRVEDALDSFRSALRLMP 339



 Score = 27.7 bits (60), Expect = 6e-04
 Identities = 32/181 (17%), Positives = 69/181 (38%), Gaps = 31/181 (17%)

Query: 20  SEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNP------- 72
           S  +A A   Y  IL+  P+   A++  G++  +     ++L   +    + P       
Sbjct: 15  SGNFAVAEPLYGAILAASPEHVEALYAYGVLLAQTGRLPQSLDHLSRAARLAPEDGRIGR 74

Query: 73  SYIPAIKNKKQVEE------KLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEIN 126
           ++   ++   ++ E      +L+ +E +       LG+    QG F++++S+F++   + 
Sbjct: 75  NFALVLQAAGRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQGRFDEAISHFQEGLALA 134

Query: 127 PYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFESALK 186
                 R N+                  G+         +A++ F KA +L P    A  
Sbjct: 135 SQDVEARCNL------------------GLACRAAGRLDEAIDAFAKAAELAPALAKAHG 176

Query: 187 N 187
           N
Sbjct: 177 N 177



 Score = 25.8 bits (55), Expect = 0.002
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 155 GVEYYKVKNYQKALECFEKAVKLNP 179
           GV   K+   ++A ECF +A++L+P
Sbjct: 213 GVALAKLGRQEEAAECFRRAMELDP 237