Pairwise Alignments

Query, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 240 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 49.7 bits (117), Expect = 4e-11
 Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 31/179 (17%)

Query: 12  SHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMN 71
           + G  L    K+ EALE ++++L+  P+  + +  +G V  ++ + E AL+ F+ +L  +
Sbjct: 5   NQGISLYKEGKFEEALEVFNQLLANTPNQPIILLHRGRVLSRMGKLELALEDFDLLLKTD 64

Query: 72  PSYIPAIKNKKQVEEKLKKQES-------------ENYNKFSKLGVENYKQGNFEKSLSY 118
                 I ++  V   LK+ E               N  ++S       + G+ E +++ 
Sbjct: 65  QYNADFISDRAVVLHLLKRNEEALSELDRALNLDPNNPYRYSSRAFLKDRIGDLEGAIAD 124

Query: 119 FEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKL 177
           +EKA E++P                     + +NNKG+   K+   +++ + F+KA KL
Sbjct: 125 YEKAIEMDPEDA------------------VSYNNKGIVEEKLGYKERSKKSFDKADKL 165



 Score = 32.3 bits (72), Expect = 7e-06
 Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 17/130 (13%)

Query: 14  GALLCNSEKYAEALECYDKILS--YYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMN 71
           G +L    K   ALE +D +L    Y  DF++   + +V   LK  E+AL   +  LN++
Sbjct: 41  GRVLSRMGKLELALEDFDLLLKTDQYNADFIS--DRAVVLHLLKRNEEALSELDRALNLD 98

Query: 72  PSYIPAIKNKKQVE-------------EKLKKQESENYNKFSKLGVENYKQGNFEKSLSY 118
           P+      ++  ++             EK  + + E+   ++  G+   K G  E+S   
Sbjct: 99  PNNPYRYSSRAFLKDRIGDLEGAIADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKS 158

Query: 119 FEKAFEINPY 128
           F+KA ++  Y
Sbjct: 159 FDKADKLVGY 168



 Score = 27.7 bits (60), Expect = 2e-04
 Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 12/87 (13%)

Query: 26  ALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNM------------NPS 73
           A+  Y+K +   P+D ++   KG+V  KL   E++ + F+    +             P 
Sbjct: 121 AIADYEKAIEMDPEDAVSYNNKGIVEEKLGYKERSKKSFDKADKLVGYQPKEYKSTNAPK 180

Query: 74  YIPAIKNKKQVEEKLKKQESENYNKFS 100
             P  K   Q+ E+LK Q +      S
Sbjct: 181 ENPVKKTPDQIPEQLKNQPTPQTKSLS 207