Pairwise Alignments

Query, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 468 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 31/200 (15%)

Query: 5   YGIQKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCF 64
           Y  + W++ G +     +Y EA+  YD  L        A F  G   +  ++YEKA + +
Sbjct: 201 YSAEAWYNLGVVYNRLGRYEEAINAYDYALIIDDSFASAYFNMGNALMNTQQYEKATEAY 260

Query: 65  NSVLNM------NPSYIPAIKNK-KQVE------EKLKKQESENYNKFSKLGVENYKQGN 111
            + +N       N  Y+ A   K  Q++      +K  K + E  + +  LG+   K+  
Sbjct: 261 LNTINSEGANSENCCYLAAAFEKLDQMDKAFTYFKKSAKLDPEYDDAWFGLGMCMLKKDK 320

Query: 112 FEKSLSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECF 171
           F +++ YF+KA                  LKL  +    W       Y + N Q + E +
Sbjct: 321 FFEAIHYFKKA------------------LKLSSVNANYWVGLADAEYHLGNLQASSEAY 362

Query: 172 EKAVKLNPKFESALKNKTMV 191
           E+A+ L P       N +++
Sbjct: 363 EEAINLEPGLMETYVNLSII 382



 Score = 37.7 bits (86), Expect = 3e-07
 Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 41/185 (22%)

Query: 3   NNYGIQKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQ 62
           NN  I    S+G LL  S K  EA++  +  L    D     +  G  +      EKA+ 
Sbjct: 99  NNEEIVLALSNGLLLNGSVK--EAIQILEDFLPMAEDKAEIYYSLGNFYRAENNTEKAIF 156

Query: 63  CFNSVLNMNPSYIPAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKA 122
            + + + +  ++  A+     + E+                     +G+F++ L ++++ 
Sbjct: 157 HYKNAVKLKINHEDALFQLAMITEE---------------------EGSFDEILQFYQEF 195

Query: 123 FEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFE 182
            + +PYS                     W N GV Y ++  Y++A+  ++ A+ ++  F 
Sbjct: 196 IDQDPYSAE------------------AWYNLGVVYNRLGRYEEAINAYDYALIIDDSFA 237

Query: 183 SALKN 187
           SA  N
Sbjct: 238 SAYFN 242



 Score = 24.3 bits (51), Expect = 0.004
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 8/56 (14%)

Query: 143 LKEILPIRWNNKGVEYYKVKNY-------QKALECFEKAVKLNPKFESALKNKTMV 191
           L++ LP+   +K   YY + N+       +KA+  ++ AVKL    E AL    M+
Sbjct: 124 LEDFLPMA-EDKAEIYYSLGNFYRAENNTEKAIFHYKNAVKLKINHEDALFQLAMI 178