Pairwise Alignments

Query, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 614 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 43/185 (23%), Positives = 85/185 (45%), Gaps = 31/185 (16%)

Query: 7   IQKWHSHGALLCNSEKYAEALECYDK---ILSYYPD--DFLAVFGKGMVFLKLKEYEKAL 61
           I+ + ++G++L +++ Y    E YDK   ++   P   D+   F +G+ + +LK+++KA 
Sbjct: 391 IRSYLAYGSVLSDAKDYKAMAENYDKAVEVIGAVPQKSDWSVFFQRGIAYERLKQWDKAE 450

Query: 62  QCFNSVLNMNPSYIPAIKN----------------KKQVEEKLKKQESENYNKFSKLGVE 105
             F   L +NP   P + N                 K +   ++ + ++ Y     LG  
Sbjct: 451 PNFKRALELNPEQ-PQVLNYLGYSWVDKGINLDEGMKMISRAVELRPNDGY-IVDSLGWA 508

Query: 106 NYKQGNFEKSLSYFEKAFEINPYSETLRKNIETT--RLKLKEILPIRWN------NKGVE 157
           +Y+ G+F++S++  E+A E+     T+  ++     R+  K     +WN      N  V+
Sbjct: 509 HYRLGDFDQSVTELERAIELKAGDPTINDHLGDAYWRVGRKIEAVYQWNRALIGDNDDVD 568

Query: 158 YYKVK 162
             KVK
Sbjct: 569 KAKVK 573



 Score = 27.7 bits (60), Expect = 4e-04
 Identities = 10/27 (37%), Positives = 20/27 (74%)

Query: 154 KGVEYYKVKNYQKALECFEKAVKLNPK 180
           +G+ Y ++K + KA   F++A++LNP+
Sbjct: 436 RGIAYERLKQWDKAEPNFKRALELNPE 462