Pairwise Alignments

Query, 191 a.a., 3'-5' exonuclease from Methanococcus maripaludis S2

Subject, 232 a.a., DNA polymerase III, epsilon chain from Agrobacterium fabrum C58

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 19/116 (16%)

Query: 3   VFLDTETTGLHP--------GQIAQLSYLVTDEDLNLKKVFNQYYSVDH--MSRSAAKVH 52
           +  DTETTGL          G I  +++  T   L+L      Y S +   +   A  VH
Sbjct: 4   IIFDTETTGLESKLDRVIEIGGIELINHFPTGRTLHL------YISPEDRKVHPDALAVH 57

Query: 53  GLTVEILDELSNGMTFEDTVDEVRDDLEDSVIIGHNISFDIRFLKAEFERLGPEYV 108
           G+T E L +      F + +D++R+  + +  + HN +FD+ F+ AEF RLG E V
Sbjct: 58  GITDEFLKDKPK---FAEVIDQIREFFDGARWVAHNATFDMGFINAEFARLGIEPV 110