Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 918 a.a., ATP-dependent, 3'-5' DNA helicase with strand annealing activity from Variovorax sp. SCN45

 Score = 56.2 bits (134), Expect = 7e-12
 Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 56/298 (18%)

Query: 69  LFIVPLKALANEKFDEFKEKYEKYGIKV-----GLSIGDFDTKENLSKFH----IIITTS 119
           L++ P++ALA +     ++  E  G +V     G   GD  + E  ++      +++TT 
Sbjct: 124 LWLTPMRALAADTLRALQQPLEALGAEVHPWSTGARSGDTSSAERSAQNQRLPSVLVTTP 183

Query: 120 EKLDSLMRHEV--EWINDVSLAVIDEIHLIGDNDRGGTLEVILTKLKNLN--AQIVGLSA 175
           E L  L+      E +  V LAV+DE H +  N RG  +++ L +L+  N    + G+SA
Sbjct: 184 ESLSLLLARADANEVLGSVRLAVVDEWHELLGNKRGVQVQLALARLRRWNPGMTVWGMSA 243

Query: 176 TIGNPEELSNWLNAKLIVDEWRPV--ELKKGIYFENELEFVKSPAKKIKQVSKNNITDL- 232
           T+GN +E    ++A L  +E   V  ++ K +  ++    +   A++        +T L 
Sbjct: 244 TLGNLKEA---MHALLGHEEGVLVQGQVPKKLVIDS---LLPGRAERFPWGGHLGLTMLP 297

Query: 233 -IVDSVEEKGSCLIFCNSKRNAVGEAKKHNLTKYLTRTEQHELNKLSEEILSILDTPTET 291
            +++ +    + L+F N++                    Q E+        ++L+   E 
Sbjct: 298 QVIEEIAASKTTLVFTNTR-------------------SQSEI-----WYQALLEARPEW 333

Query: 292 CKALSECIKKGIAFHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLN-LPCRRAI 348
             +        IA HH  L  + R+ VE G ++  +K + CT +L  G++ LP  R +
Sbjct: 334 AGS--------IALHHGSLDREVREWVELGLKSGELKAVVCTSSLDLGVDFLPVERVL 383