Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1457 a.a., Uncharacterized ATP-dependent DNA helicase PA3272 from Variovorax sp. SCN45

 Score = 53.1 bits (126), Expect = 1e-10
 Identities = 85/383 (22%), Positives = 149/383 (38%), Gaps = 80/383 (20%)

Query: 32  KNFLICIPTASGKTLIGEMALLNHILDENKNLTGKKG----LFIVPLKALANE------- 80
           ++ L+  PT SGKTL   +A L+ ++       G       +++ PLKAL+N+       
Sbjct: 36  RDTLVAAPTGSGKTLTAFLAALDELVRRGLEPGGLPDETAVVYVSPLKALSNDIRLNLDA 95

Query: 81  KFDEFKEKYEKYG-----IKVGLSIGDFDTKENLSKF----HIIITTSEKLDSLMRHEV- 130
                + +    G     I+  +  GD   +E         H+++TT E L  L+     
Sbjct: 96  PLAGIRAELAALGLPDVDIRTAVRTGDTPQRERQQSLRRPPHVLVTTPESLYVLLGSTSG 155

Query: 131 -EWINDVSLAVIDEIHLIGDNDRGGTLEVILTKLK-------NLNAQIVGLSATIGNPEE 182
              +  V   ++DEIH +  + RG  L + L +L+        +    +GLSAT    +E
Sbjct: 156 RRMLGTVRSVIVDEIHAVAASKRGSHLALSLERLQARCLAHSGVRPVRIGLSATQKPIDE 215

Query: 183 LSNWL--NAKLIVD---EWRPVELKKGIYFENELEFVKSPAKKIKQVSK-NNITDLIVDS 236
           ++ +L     L  D   +   V++      +  LE   +P + +    +   +   + + 
Sbjct: 216 VARFLVGAGALRADGTADCAVVDIGYAKQRDLALELPPTPLEAVMSGGQWTQVYARVAEL 275

Query: 237 VEEKGSCLIFCNSKRNAVGEAKKHNLTKYLTRTEQHELNKLSEEILSILDTPTETCKALS 296
           V    + L+F N++R A              RT +H  + L                   
Sbjct: 276 VWLHKTTLVFVNTRRMA-------------ERTARHLGDILG------------------ 304

Query: 297 ECIKKGIAFHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLNLPCRRAIVRDIKRYS 356
              K+ +A HH  L+ + R   E   +   +KV+  T +L  GL+       + D+    
Sbjct: 305 ---KEAVAAHHGSLSKETRLDAEQRLKRGALKVLVATASLELGLD-------IGDVDMVC 354

Query: 357 QNGLVDIPRMEIQQCIGRAGRPG 379
           Q G    PR  I   + RAGR G
Sbjct: 355 QIG---SPR-AIATFLQRAGRSG 373