Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 803 a.a., ATP-dependent helicase, DEAD/DEAH box family, associated with Flp pilus assembly from Sphingobium sp. HT1-2

 Score = 66.6 bits (161), Expect = 5e-15
 Identities = 92/432 (21%), Positives = 168/432 (38%), Gaps = 65/432 (15%)

Query: 35  LICIPTASGKTLIGEMALLNHILDENKNLTGKKGLFIVPLKALANEKFDEFKEKYEKYGI 94
           L+  PT +GKTL G +  L  ++    +  G   L++ PLKALA +         E+ G+
Sbjct: 38  LLVAPTGAGKTLAGFLPTLADLIGNPAD--GLHTLYVSPLKALAVDVRRNLLTPIEEMGL 95

Query: 95  KVGLSIGDFDT------KENLSKFHIIITTSEKLDSLMRHEVEWI--NDVSLAVIDEIHL 146
            + +     DT      ++ +   HI++TT E L  L+ +    +    +   ++DE+H 
Sbjct: 96  PIRVETRTGDTPSDRKARQRVRPPHILLTTPESLSLLLSYPDAALLFEHLRTVIVDEVHA 155

Query: 147 IGDNDRGGTLEVILTKLKNLNAQI--VGLSATIGNPEELSNWLNAKLIVDEWRPVELKKG 204
                RG  L + + +L+ +N  +  V LSAT+ + +    WL     +D   PV  + G
Sbjct: 156 FATQKRGDLLNLSMARLQAINPDLRRVALSATVADVDAYRAWLAPDGDIDAVTPVLGEAG 215

Query: 205 IYFENELEFVKSPAKKIKQVSKNNITDLIVDSVEEKGSCLIFCNSKRNAVGEAKKHNLTK 264
              +  +   +          K   + ++ + +  + + L+FCN++  A           
Sbjct: 216 AEPDVTILIPEGRVPWSGHSGKYAASQVMAE-IAARQTTLVFCNTRGLA----------- 263

Query: 265 YLTRTEQHELNKLSEEILSILDTPTETCKALSECIKKGIAFHHAGLTYQHRKIVEDGFRN 324
                       + +E+ S+ D                IA HH  L+ + R+ VE     
Sbjct: 264 ----------ELIFQELWSVNDA------------NLPIAIHHGSLSIEARRKVETAMAA 301

Query: 325 RLIKVICCTPTLSAGL---NLPCRRAIVRDIKRYSQNGLVDIPRMEIQQCIGRAGRPGLD 381
             ++ +  T +L  G+   N+ C       I+  +  G        + Q IGRA    LD
Sbjct: 302 GKLRALVATASLDLGVDWGNVDC------VIQMGAPKG-----SSRLLQRIGRANH-RLD 349

Query: 382 PYGEGIIYIKNEKEIEKAYEIL----TGSVENIYSKLANQKVLRIHILGLISTGEIKDGQ 437
              E I+   N  E  +A   L     G  +    +     VL  H++ +   G  ++ +
Sbjct: 350 MASEAILIPGNRFEYLEARAALDAVEAGERDADDFRPGALDVLAQHVMAIACAGPFREEE 409

Query: 438 NLVNFMKNTFYA 449
            L      T Y+
Sbjct: 410 LLAEVRSATPYS 421