Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 507 a.a., hypothetical protein from Methylophilus sp. DMC18

 Score = 43.1 bits (100), Expect = 3e-08
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)

Query: 303 IAFHHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLNLPCRRAIVRDIKRYSQNGLVD 362
           +A  +  L+ + R++    F +    ++  T  +  GLNLP RR I  +I ++       
Sbjct: 217 VATIYGALSPEVRRVESARFASGEAHILVATDAIGMGLNLPIRRVIFANIHKFDGIASRP 276

Query: 363 IPRMEIQQCIGRAGRPGLDPYGEGIIYIKNEKE 395
           +   E++Q  GRAGR GL  Y  G + +  + E
Sbjct: 277 LNATEMRQIAGRAGRHGL--YDTGYVTVLEDDE 307



 Score = 28.9 bits (63), Expect = 7e-04
 Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 24/150 (16%)

Query: 39  PTASGKTLIGEMALLNHILDENKNLTGKKGLFIVPLKALANEKFDEFKEKYEKYGIKVGL 98
           PT SGKT      L             + G+++ PL+ LA E  D   +     G+   L
Sbjct: 29  PTNSGKTYQALETLRQ----------AESGVYLAPLRLLAMEVRDRLMQA----GVPCNL 74

Query: 99  SIGDFDTKENLSKFHIIITTSEKLDSLMRHEVEWINDVSLAVIDEIHLIGDNDRGGTLEV 158
             G+       ++      T+  ++ L          V +AVIDEI ++ D DRG     
Sbjct: 75  VTGEERVMVPGARH-----TASTIEMLRPDHA-----VDVAVIDEIQMLMDPDRGSAWTA 124

Query: 159 ILTKLKNLNAQIVGLSATIGNPEELSNWLN 188
            L  +      I G ++   +   + + LN
Sbjct: 125 ALVGVPAKQVFICGANSVTSSCTRVLDTLN 154