Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1148 a.a., transcription-repair coupling factor (mfd) from Enterobacter asburiae PDN3

 Score = 43.5 bits (101), Expect = 6e-08
 Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 23/147 (15%)

Query: 14  ELRPPQKKVIDEGLFDKTKNF----LICIPTASGKTLIGEMALLNHILDENKNLTGKKGL 69
           E  P Q + I+  L D  +      L+C     GKT   E+A+    L    N   K+  
Sbjct: 600 ETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKT---EVAMRAAFLAVENN---KQVA 653

Query: 70  FIVPLKALANEKFDEFKEKYEKYGIKVGLSIGDFDTKENL--------SKFHIIITTSEK 121
            +VP   LA + FD F++++  + +++ +      TKE           K  I+I T + 
Sbjct: 654 VLVPTTLLAQQHFDNFRDRFANWPVRIEMLSRFRSTKEQTQILEQASEGKIDILIGTHK- 712

Query: 122 LDSLMRHEVEWINDVSLAVIDEIHLIG 148
              L++ +V+W  D+ L ++DE H  G
Sbjct: 713 ---LLQSDVKW-KDLGLLIVDEEHRFG 735