Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1538 a.a., ATP-dependent helicase from Escherichia coli ECRC62

 Score = 70.1 bits (170), Expect = 8e-16
 Identities = 102/430 (23%), Positives = 183/430 (42%), Gaps = 67/430 (15%)

Query: 30  KTKNFLICIPTASGKTLIGEMALLNHILDENKNLTGK-------KGLFIVPLKALANEK- 81
           ++++ L+  PT SGKTL   +  L+ +  E    T +       + L+I P+KAL  +  
Sbjct: 43  RSEHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQ 102

Query: 82  ----------FDEFKEKYE-KYGIKVGLSIGDFDTKENLSKF-----HIIITTSEKLDSL 125
                      DE + + E +  ++VG+  GD   +E  SK       I+ITT E L  +
Sbjct: 103 RNLQLPLKGIADERRRRGETEVNLRVGIRTGDTPAQER-SKLTRNPPDILITTPESLYLM 161

Query: 126 MRHEV-EWINDVSLAVIDEIHLIGDNDRGGTLEVILTKLKNL---NAQIVGLSATIGNPE 181
           +     E +  V   +IDE+H +  + RG  L + L +L  L   +AQ +GLSAT+ +  
Sbjct: 162 LTSRARETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSAS 221

Query: 182 ELSNWLNAKLIVDEWRPVELK----KGIYFENELEFVKSPAKKIKQVSKNN--------I 229
           +++ +L     V    P  ++    + +     ++ V S A    + S           I
Sbjct: 222 DVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASSTGEDSHAGREGSIWPYI 281

Query: 230 TDLIVDSVEEKGSCLIFCNSKRNAVGEAKKHNLTKYLTRTEQHELNKLSEEILSILDTPT 289
              I+D V    S ++F NS+    G A+K  LT  L       L + S  I        
Sbjct: 282 ETGILDEVLRHRSTIVFTNSR----GLAEK--LTARLNELYAARLQR-SPSIAVDAAHFE 334

Query: 290 ETCKALSECIKKGIAF----HHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLNLPCR 345
            T  A S  ++    F    HH  ++ + R I E   ++  ++ +  T +L  G+++   
Sbjct: 335 STSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAV 394

Query: 346 RAIVRDIKRYS-QNGLVDIPRMEIQQCIGRAGRPGLDPYGEGIIYIKNEKEIEKAYEIL- 403
             +++     S  +GL         Q IGRAG   +    +G+ + +  +++  +  I+ 
Sbjct: 395 DLVIQVATPLSVASGL---------QRIGRAGHQ-VGGVSKGLFFPRTRRDLVDSAVIVE 444

Query: 404 ---TGSVENI 410
               G +EN+
Sbjct: 445 CMFAGRLENL 454