Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1538 a.a., ATP-dependent helicase from Escherichia coli ECRC100

 Score = 70.9 bits (172), Expect = 5e-16
 Identities = 100/425 (23%), Positives = 179/425 (42%), Gaps = 67/425 (15%)

Query: 35  LICIPTASGKTLIGEMALLNHILDENKNLTGK-------KGLFIVPLKALANEK------ 81
           L+  PT SGKTL   +  L+ +  E    T +       + L+I P+KAL  +       
Sbjct: 48  LVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQRNLQI 107

Query: 82  -----FDEFKEKYE-KYGIKVGLSIGDFDTKENLSKF-----HIIITTSEKLDSLMRHEV 130
                 DE + + E +  ++VG+  GD   +E  SK       I+ITT E L  ++    
Sbjct: 108 PLKGIADERRRRGETEVNLRVGIRTGDTPAQER-SKLTRNPPDILITTPESLYLMLTSRA 166

Query: 131 -EWINDVSLAVIDEIHLIGDNDRGGTLEVILTKLKNL---NAQIVGLSATIGNPEELSNW 186
            E +  V   +IDE+H +  + RG  L + L +L  L   +AQ +GLSAT+ +  +++ +
Sbjct: 167 RETLRGVETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGLSATVRSASDVAAF 226

Query: 187 LNAKLIVDEWRP-------VELKKGIYFENELEFVKSPAKKIKQVSKNN-----ITDLIV 234
           L     V    P       + +   +   +++  V S   +     +       I   I+
Sbjct: 227 LGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASGTGEDSHAGREGSIWPYIETGIL 286

Query: 235 DSVEEKGSCLIFCNSKRNAVGEAKKHNLTKYLTRTEQHELNKLSEEILSILDTPTETCKA 294
           D V    S ++F NS+    G A+K  LT  L       L + S  I +       T  A
Sbjct: 287 DEVLRHRSTIVFTNSR----GLAEK--LTARLNELYAARLQR-SPSIAADAAHFESTSGA 339

Query: 295 LSECIKKGIAF----HHAGLTYQHRKIVEDGFRNRLIKVICCTPTLSAGLNLPCRRAIVR 350
            S  ++    F    HH  ++ + R I E   ++  ++ +  T +L  G+++     +++
Sbjct: 340 TSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLELGIDMGAVELVIQ 399

Query: 351 DIKRYS-QNGLVDIPRMEIQQCIGRAGRPGLDPYGEGIIYIKNEKEIEKAYEIL----TG 405
                S  +GL         Q IGRAG   +    +G+ + +  +++  +  I+     G
Sbjct: 400 VATPLSVASGL---------QRIGRAGHQ-IGGISKGLFFPRTRRDLVDSAVIVECMFAG 449

Query: 406 SVENI 410
            +EN+
Sbjct: 450 RLENL 454