Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 586 a.a., putative ATP-dependent DNA or RNA helicase from Escherichia coli BL21

 Score = 45.8 bits (107), Expect = 6e-09
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 28/172 (16%)

Query: 12  ITELRPPQKKVIDEGL--FDKTKN-FLICIPTASGKTLIGEMALLNHILDENKNLTGKKG 68
           I  LRP Q++ +D  L  F + K   +I +PT +GK+L+         + E   L   + 
Sbjct: 2   IFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLV---------IAELARLARGRV 52

Query: 69  LFIVPLKALANEKFDEFKEKYEKYGIKVGLSIGDFDTKENLSK--FHIIITTSEKLDSLM 126
           L +  +K L  +       KY+  G++  +       KE+  K  F  + + +  LD+  
Sbjct: 53  LVLAHVKELVAQNH----AKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVARNLDAFQ 108

Query: 127 RHEVEWINDVSLAVIDEIHLIGDNDRGGTLEVILTKLKNLN--AQIVGLSAT 176
                   + SL ++DE H IGD D     + ILT L  +N   +++GL+AT
Sbjct: 109 -------GEFSLLIVDECHRIGD-DEESQYQQILTHLTKVNPHLRLLGLTAT 152