Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 808 a.a., ATP-dependent RNA helicase DbpA from Azospirillum sp. SherDot2

 Score = 64.7 bits (156), Expect = 2e-14
 Identities = 75/328 (22%), Positives = 134/328 (40%), Gaps = 51/328 (15%)

Query: 29  DKTKNFLICIPTASGKTLIGEMALLNHILDENKNLTGKKGLFIVPLKALANEKFDEFKEK 88
           ++ ++ L+  PT  GKTL G +  L  + +  +   G   L+I PLKALA +     ++ 
Sbjct: 6   ERGESALLIAPTGGGKTLAGFLPSLIELAERPRE--GLHTLYISPLKALAVDIQRNLEQP 63

Query: 89  YEKYGIKVGLSIGDFDTKENLSKF------HIIITTSEKLDSLMRHEV--EWINDVSLAV 140
             +  + +       DT E   +       H+++TT E L  L+ +    +    +   +
Sbjct: 64  IAEMRLPIRAENRTGDTPEAKRRRQRTHPPHMLMTTPESLALLLSYTDADKLFRTLRCVI 123

Query: 141 IDEIHLIGDNDRGGTLEVILTKLKNLN--AQIVGLSATIGNPEELSNWLNAK-----LIV 193
           IDE+H +    RG  L + L +L  L   A+ VGLSAT+  PE L  WL+ +        
Sbjct: 124 IDELHALAGTKRGDLLALGLARLSRLAPAARRVGLSATVAEPERLLAWLSRRGRHDGSDS 183

Query: 194 DEWRPVELKKGIYFENELEFVKSPAKKIKQVSKNNITDLIVDSVEEKGSCLIFCNSKRNA 253
           D+ R V  + G   E E+   +        ++ + + + I + V  + + L+F N++   
Sbjct: 184 DDVRLVLGRSGAQAEVEILTSQERVPWAGHMAMHAMKE-IYERVRRQRTTLLFVNTR--- 239

Query: 254 VGEAKKHNLTKYLTRTEQHELNKLSEEILSILDTPTETCKALSECIKKGIAFHHAGLTYQ 313
              A+   + + L R     L                            IA HH  L  +
Sbjct: 240 ---AQAELVFQALWRVNDDNL---------------------------PIALHHGSLAVE 269

Query: 314 HRKIVEDGFRNRLIKVICCTPTLSAGLN 341
            R+ VE       ++ +  T +L  G++
Sbjct: 270 QRRKVEGAMARGELRAVVATSSLDLGID 297