Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 615 a.a., cold-shock dead-box protein A from Agrobacterium fabrum C58

 Score = 44.7 bits (104), Expect = 1e-08
 Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 9/165 (5%)

Query: 3   VLDILKENKITELRPPQKKVIDEGLFDKTKNFLICIPTASGKTLIGEMALLNHILDENKN 62
           +   L++    +L P Q+ ++   L +K  + L+   T SGKT+   +AL   +L EN  
Sbjct: 11  IAQALEKRGYKDLTPVQQAMLAPELANK--DALVSAQTGSGKTVAFGIALATTLLSENTR 68

Query: 63  L---TGKKGLFIVPLKALANEKFDEFKEKYEKYGIKVGLSIGDFDTKENLSKF----HII 115
               +    L I P + LA +   E +  YE  G+ +   +G  D +          HI+
Sbjct: 69  FGQASAPLALAIAPTRELAMQVKRELEWLYEFAGVSIASCVGGMDIRNERRALERGAHIV 128

Query: 116 ITTSEKLDSLMRHEVEWINDVSLAVIDEIHLIGDNDRGGTLEVIL 160
           + T  +L   ++     ++ +   V+DE   + D      LE IL
Sbjct: 129 VGTPGRLCDHIKRNALDLSSIRAVVLDEADEMLDLGFREDLEFIL 173