Pairwise Alignments

Query, 747 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 792 a.a., large atp-dependant helicase-related protein from Agrobacterium fabrum C58

 Score = 65.1 bits (157), Expect = 1e-14
 Identities = 72/330 (21%), Positives = 133/330 (40%), Gaps = 64/330 (19%)

Query: 35  LICIPTASGKTLIGEMALLNHILDENK-----NLTGKKGLFIVPLKALANEKFDEFKEKY 89
           L+  PT +GKTL G MA L  + +  K        G   L+I PLKALA +         
Sbjct: 2   LLIAPTGAGKTLGGFMASLTDLAERGKVPPGSGFVGVHTLYISPLKALAVDIERNLTRPV 61

Query: 90  EKYGIKVGLSIGDFDT------KENLSKFHIIITTSEKLDSLM--RHEVEWINDVSLAVI 141
            + G+ + +     DT      ++ +    I++TT E++  L+  +    +  D+   V+
Sbjct: 62  SEMGLPIVIETRTGDTPQAKRQRQKVKPPDILLTTPEQVSLLLANKEAERFFRDLKYVVL 121

Query: 142 DEIHLIGDNDRGGTLEVILTKLKN--LNAQIVGLSATIGNPEELSNWL--------NAKL 191
           DE+H +  + RG  L + L +++    + + +GLSAT+  P +L  +L         A L
Sbjct: 122 DELHSLVTSKRGHLLSLALARVRRHAPDVRFIGLSATVAEPMDLRRYLAPQGQGEPPAGL 181

Query: 192 IVDEWRPVELKKGIYFENELEFVKSPAKKIKQVSKNNITDLIVDSVEEKGSCLIFCNSKR 251
           I  E      K  I   +  E +       +   K+     + +++++  + L+F N++ 
Sbjct: 182 ITVEG---GAKPDISILHTEERIPWSGHSARYAGKD-----LYEALKQHQTTLVFVNTRS 233

Query: 252 NAVGEAKKHNLTKYLTRTEQHELNKLSEEILSILDTPTETCKALSECIKKGIAFHHAGLT 311
            A                      ++ +E+ ++ D                IA HH  L 
Sbjct: 234 QA---------------------ERVFQELWTVNDD------------NLPIALHHGSLD 260

Query: 312 YQHRKIVEDGFRNRLIKVICCTPTLSAGLN 341
              R+ VE       ++ +  T TL  G++
Sbjct: 261 AGQRRRVEAAMAENKLRAVVATSTLDLGID 290