Pairwise Alignments
Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 197 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Score = 68.6 bits (166), Expect = 1e-16
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 31/196 (15%)
Query: 152 GTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKG 211
G L +K+ EALE Y+K+L P D G F +K+YEKA+Q ++ LN +
Sbjct: 14 GALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPS 73
Query: 212 DFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLE 271
+K KL K + +NY + ++G+ Y ++E ++ Y E
Sbjct: 74 YIPAIKNKKQVEEKLKK-------------QESENYNKFSKLGVENYKQGNFEKSLSYFE 120
Query: 272 LANERNPLNPSILVKL------------------GRTYVKLRNYNKGLEFMEKALDKDSE 313
A E NP + ++ + G Y K++NY K LE EKA+ + +
Sbjct: 121 KAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPK 180
Query: 314 YAKAWCYKGYILNLLE 329
+ A K + L++
Sbjct: 181 FESALKNKTMVQKLIK 196
Score = 50.8 bits (120), Expect = 3e-11
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 28/179 (15%)
Query: 24 NSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPNDLEII 83
NS KY +++E ++K L+ P + A + KG + L + + A + L++ P+ + I
Sbjct: 19 NSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPSYIPAI 78
Query: 84 KSYTMLLNSLELFKESVEILKNVSESDDKIIEILGDAYLKTGKFNEAILQYNNILERKP- 142
K+ + L+ K SE+ +K + LG K G F +++ + E P
Sbjct: 79 KNKKQVEEKLK---------KQESENYNKFSK-LGVENYKQGNFEKSLSYFEKAFEINPY 128
Query: 143 -------------RYKEILA----KKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKN 184
+ KEIL KG +K + +ALE +EK +K++P KN
Sbjct: 129 SETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLNPKFESALKN 187
Score = 42.7 bits (99), Expect = 8e-09
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 8 KSKDPKKLLETGTEYYNSGKYQKSIEYFNKTLNSEP------KN------------PDAW 49
+S++ K + G E Y G ++KS+ YF K P KN P W
Sbjct: 92 ESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRW 151
Query: 50 YFKGNAYHMLGKSKLAQDSYEKALSIRPNDLEIIKSYTML 89
KG Y+ + + A + +EKA+ + P +K+ TM+
Sbjct: 152 NNKGVEYYKVKNYQKALECFEKAVKLNPKFESALKNKTMV 191
Score = 40.4 bits (93), Expect = 4e-08
Identities = 37/173 (21%), Positives = 70/173 (40%), Gaps = 28/173 (16%)
Query: 49 WYFKGNAYHMLGKSKLAQDSYEKALSIRPNDLEIIKSYTMLLNSLELFKESVEILKNVSE 108
W+ G K A + Y+K LS P+D + M+ L+ ++++++ +V
Sbjct: 10 WHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLN 69
Query: 109 SDDKIIEILGDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIY 168
+ I +K K E L+ + Y + +K G F+++L +
Sbjct: 70 MNPSYIPA-----IKNKKQVEEKLK----KQESENYNK-FSKLGVENYKQGNFEKSLSYF 119
Query: 169 EKVLKISPYDTEV------------------WKNIGNAFYTVKKYEKAIQFYD 203
EK +I+PY + W N G +Y VK Y+KA++ ++
Sbjct: 120 EKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFE 172
Score = 38.9 bits (89), Expect = 1e-07
Identities = 38/167 (22%), Positives = 64/167 (38%), Gaps = 39/167 (23%)
Query: 218 SKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANERN 277
S G L K EAL+ Y K+L + ++ G+++ ++YE A+ N
Sbjct: 12 SHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMN 71
Query: 278 PL---------------------NPSILVKLGRTYVKLRNYNKGLEFMEKA--------- 307
P N + KLG K N+ K L + EKA
Sbjct: 72 PSYIPAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINPYSET 131
Query: 308 LDKDSEYAK---------AWCYKGYILNLLERHYEAIDCYKKAISIN 345
L K+ E + W KG ++ + +A++C++KA+ +N
Sbjct: 132 LRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAVKLN 178
Score = 26.9 bits (58), Expect = 5e-04
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 318 WCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGKEDYSKEAYENAVN 377
W G +L E++ EA++CY K +S +D V+ + + + + + + + +N
Sbjct: 10 WHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLN 69
Query: 378 LENHNMLP 385
+ N + +P
Sbjct: 70 M-NPSYIP 76