Pairwise Alignments

Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score =  134 bits (338), Expect = 3e-36
 Identities = 93/339 (27%), Positives = 152/339 (44%), Gaps = 34/339 (10%)

Query: 13  KKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKA 72
           K   + G E YN G Y  SI  +N  L   PK+ + W  KGN+   LG    + + ++KA
Sbjct: 26  KSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGESTECFDKA 85

Query: 73  LSIRPNDLEIIKSYTMLLNSLELFKESVEILKNVSESDDKIIEILGDAYLKTGKFNEAIL 132
           L I P + E                                   LG    KTG + +A+ 
Sbjct: 86  LLIDPENSEAFNG-------------------------------LGTVLSKTGNYQKALE 114

Query: 133 QYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTV 192
            Y+  L       E    KG  L  ++++ EA++ ++K + I+  +++VW N G   + +
Sbjct: 115 MYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKL 174

Query: 193 KKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLY-TKVLEKHIQNYEPWC 251
            +YEK+I  Y+  L   +      L KG++  KL     A++ + T         Y P+ 
Sbjct: 175 GEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFNTAETINPKSEYPPYY 234

Query: 252 RVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKD 311
           +    Y DTE++E A+ Y + A E NP N  IL+  G    K++NY+  +   + A+  D
Sbjct: 235 KADA-YRDTENFEYALKYYDEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLD 293

Query: 312 SEYAKAWCYKGYILNLLERHYEAIDCYKKAISIN-KNDS 349
            +  + W  KG     L+ +  +I CYKKA+ I  KN++
Sbjct: 294 PKNVQIWILKGNSYVGLKDYESSISCYKKALEIEPKNEN 332



 Score = 80.9 bits (198), Expect = 5e-20
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 34/206 (16%)

Query: 174 ISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEAL 233
           I    ++ + + G   Y    Y  +I  Y++ L E+     + ++KG++L KLG   E+ 
Sbjct: 20  IGDQKSKSYNDKGLELYNQGNYVDSISEYNLALLENPKSAEIWVNKGNSLLKLGIYGEST 79

Query: 234 DLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVK 293
           + + K L    +N E +  +G                           ++L K G     
Sbjct: 80  ECFDKALLIDPENSEAFNGLG---------------------------TVLSKTG----- 107

Query: 294 LRNYNKGLEFMEKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWM 353
             NY K LE  +K+L+ DSE ++AW  KG  LN ++R+ EAIDC+ K+ISIN  +S  W 
Sbjct: 108 --NYQKALEMYDKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFDKSISINAKNSDVWY 165

Query: 354 HLSNVYKTIGKEDYSKEAYENAVNLE 379
           +       +G+ + S ++Y  A+ ++
Sbjct: 166 NKGETQFKLGEYEKSIDSYNKALLID 191



 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 39/205 (19%)

Query: 19  GTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPN 78
           G    N  +Y ++I+ F+K+++   KN D WY KG     LG+ + + DSY KAL I   
Sbjct: 134 GITLNNMQRYSEAIDCFDKSISINAKNSDVWYNKGETQFKLGEYEKSIDSYNKALLIDEK 193

Query: 79  DLEIIKSYTMLLNSLELFKESVEILKNVSESDDKIIEI----LGDAYLKTGKFNEAILQY 134
               +         L+ ++ ++E   N +E+ +   E       DAY  T  F  A+  Y
Sbjct: 194 METALLGKGNSYLKLQNYESAIECF-NTAETINPKSEYPPYYKADAYRDTENFEYALKYY 252

Query: 135 NNILERKPRYKEILAKKGTAL----------------------------------VGLKK 160
           +  LE  P   +IL  KG  L                                  VGLK 
Sbjct: 253 DEALEINPSNSDILISKGICLDKMKNYSAAISNFDLAIQLDPKNVQIWILKGNSYVGLKD 312

Query: 161 FDEALEIYEKVLKISPYDTEVWKNI 185
           ++ ++  Y+K L+I P +    +NI
Sbjct: 313 YESSISCYKKALEIEPKNENAKENI 337