Pairwise Alignments

Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 558 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 45.1 bits (105), Expect = 5e-09
 Identities = 57/300 (19%), Positives = 118/300 (39%), Gaps = 9/300 (3%)

Query: 89  LLNSLELFKESVEILKNVSESDDKIIEILGD--AYLKTGKFNEAILQYNNI-LERKPRYK 145
           LL+          + + V  + D + E L D  + ++ G   E  L ++ + L  +  + 
Sbjct: 235 LLDGRRQLAAGTNLPRVVETARDGLAEALFDTSSLVRQGNAQELSLVFSRLALSLRADFP 294

Query: 146 EILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMY 205
                   A+V   + DEA  +Y  + + S         +      +K+ + A+      
Sbjct: 295 LAQLLLADAMVAQGRLDEANALYSAMNRASQPGAFARLKLAVNLDEMKQTDAALSELTSL 354

Query: 206 LNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKH-----IQNYEPWCRVGLLYYDT 260
             E        ++ GD LR+  +  EA D Y   L ++      +N+  +   G+ Y   
Sbjct: 355 AAEWPESPEALMTMGDVLRRHKRYAEAADAYGAALARNGGSQDARNWSLFYARGIAYERA 414

Query: 261 EDYETAIYYLELANERNPLNPSILVKLGRTYVKLR-NYNKGLEFMEKALDKDSEYAKAWC 319
           + +  A   +  A   +P  P +L  LG T+V    N  KG + +E+A++          
Sbjct: 415 KQWSKAEPDMLEALRLSPDQPDVLNYLGYTWVDQGINVEKGRKLIERAVELRPNDGAIVD 474

Query: 320 YKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGKEDYSKEAYENAVNLE 379
             G+ L  +     A+   ++A  +   D     HL + +  +G++  ++  ++ A+ L+
Sbjct: 475 SLGWALYRMGEFQAAVKYLERASELKPEDPTVNEHLGDAFWQVGRDTEARYQWQRAMGLD 534



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 34/181 (18%), Positives = 77/181 (42%), Gaps = 9/181 (4%)

Query: 10  KDPKKLLETGTEYYNSGKYQKSIEYFNKTL-----NSEPKNPDAWYFKGNAYHMLGKSKL 64
           + P+ L+  G       +Y ++ + +   L     + + +N   +Y +G AY    +   
Sbjct: 360 ESPEALMTMGDVLRRHKRYAEAADAYGAALARNGGSQDARNWSLFYARGIAYERAKQWSK 419

Query: 65  AQDSYEKALSIRPNDLEIIK--SYTMLLNSLELFK--ESVEILKNVSESDDKIIEILGDA 120
           A+    +AL + P+  +++    YT +   + + K  + +E    +  +D  I++ LG A
Sbjct: 420 AEPDMLEALRLSPDQPDVLNYLGYTWVDQGINVEKGRKLIERAVELRPNDGAIVDSLGWA 479

Query: 121 YLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTE 180
             + G+F  A+       E KP    +    G A   + +  EA   +++ + + P   +
Sbjct: 480 LYRMGEFQAAVKYLERASELKPEDPTVNEHLGDAFWQVGRDTEARYQWQRAMGLDPEPEQ 539

Query: 181 V 181
           +
Sbjct: 540 I 540



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 42/197 (21%), Positives = 76/197 (38%), Gaps = 20/197 (10%)

Query: 130 AILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKIS--PYDTEVWKNI-- 185
           A+ +  ++    P   E L   G  L   K++ EA + Y   L  +    D   W     
Sbjct: 347 ALSELTSLAAEWPESPEALMTMGDVLRRHKRYAEAADAYGAALARNGGSQDARNWSLFYA 406

Query: 186 -GNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKT--------NEALDLY 236
            G A+   K++ KA    DM          ++  + D L  LG T         +   L 
Sbjct: 407 RGIAYERAKQWSKAEP--DML-----EALRLSPDQPDVLNYLGYTWVDQGINVEKGRKLI 459

Query: 237 TKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRN 296
            + +E    +      +G   Y   +++ A+ YLE A+E  P +P++   LG  + ++  
Sbjct: 460 ERAVELRPNDGAIVDSLGWALYRMGEFQAAVKYLERASELKPEDPTVNEHLGDAFWQVGR 519

Query: 297 YNKGLEFMEKALDKDSE 313
             +     ++A+  D E
Sbjct: 520 DTEARYQWQRAMGLDPE 536