Pairwise Alignments

Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 728 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 65.5 bits (158), Expect = 5e-15
 Identities = 51/230 (22%), Positives = 101/230 (43%), Gaps = 3/230 (1%)

Query: 12  PKKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEK 71
           P+     G    + GK  ++ E   + +     NP A    G+A    GK+  A+ S+++
Sbjct: 39  PEPFYYLGVALLSGGKPDEAAETLTRLIRKHGDNPMALNALGSAQAASGKTGPAEKSFKR 98

Query: 72  ALSIRPNDLEIIKSYTMLLNSLELFKESVEILKNVSESDDKII---EILGDAYLKTGKFN 128
            L++ P+  +  ++   LL   +   E++  L++V   +   +    +LG A   TG+  
Sbjct: 99  VLALAPDLSDAAENLARLLIESQRAAEALAPLRSVLSREPGRLASRHLLGRALRDTGELE 158

Query: 129 EAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNA 188
            A+ ++  +L+ +P +   L   G       K ++AL  +E +L ++P D     N    
Sbjct: 159 GAMAEFQAVLKAQPDFAPALNDLGLLYFAGGKGEDALACFEHLLALNPADHVAANNRALT 218

Query: 189 FYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTK 238
              + + E+A Q Y   L  H     V L+ G  L ++G+  +++    K
Sbjct: 219 LRVLNRPEEAEQQYRAILARHPQAPEVNLNLGKLLARMGRVMDSVPYLEK 268



 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 47/216 (21%), Positives = 77/216 (35%), Gaps = 37/216 (17%)

Query: 118 GDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEI---------- 167
           G   L+ GK++EA  Q+  +  R P   E     G AL+   K DEA E           
Sbjct: 12  GIGALQQGKWDEAARQFRTLTGRTPNAPEPFYYLGVALLSGGKPDEAAETLTRLIRKHGD 71

Query: 168 ------------------------YEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYD 203
                                   +++VL ++P  ++  +N+       ++  +A+    
Sbjct: 72  NPMALNALGSAQAASGKTGPAEKSFKRVLALAPDLSDAAENLARLLIESQRAAEALAPLR 131

Query: 204 MYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDY 263
             L+   G        G ALR  G+   A+  +  VL+           +GLLY+     
Sbjct: 132 SVLSREPGRLASRHLLGRALRDTGELEGAMAEFQAVLKAQPDFAPALNDLGLLYFAGGKG 191

Query: 264 ETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNK 299
           E A+   E       LNP+  V      + LR  N+
Sbjct: 192 EDALACFE---HLLALNPADHVAANNRALTLRVLNR 224