Pairwise Alignments
Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 798 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1
Score = 82.8 bits (203), Expect = 3e-20
Identities = 73/343 (21%), Positives = 137/343 (39%), Gaps = 3/343 (0%)
Query: 23 YNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPNDLEI 82
+ SG + + + L + P++ +A Y G G+ + D +A + P D I
Sbjct: 13 HRSGNFAVAEPLYGAILAASPEHVEALYAYGVLLAQTGRLPQSLDHLSRAARLAPEDGRI 72
Query: 83 IKSYTMLLNSLELFKESVEILKNVSESDDKIIEI---LGDAYLKTGKFNEAILQYNNILE 139
+++ ++L + ES + + + E LG G+F+EAI + L
Sbjct: 73 GRNFALVLQAAGRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQGRFDEAISHFQEGLA 132
Query: 140 RKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAI 199
+ E G A + DEA++ + K +++P + N+G A + ++ A+
Sbjct: 133 LASQDVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAV 192
Query: 200 QFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYD 259
+ L V G AL KLG+ EA + + + +E N +G D
Sbjct: 193 GAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQD 252
Query: 260 TEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSEYAKAWC 319
E A P + S + G + KL ++ + ++ L+ D AW
Sbjct: 253 LGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPANGPAWL 312
Query: 320 YKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTI 362
+G L R +A+D ++ A+ + +D+ L N+ K I
Sbjct: 313 NRGKALYEAGRVEDALDSFRSALRLMPDDADALCELVNLRKVI 355
Score = 63.5 bits (153), Expect = 2e-14
Identities = 60/278 (21%), Positives = 119/278 (42%), Gaps = 8/278 (2%)
Query: 26 GKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPNDLEIIKS 85
G++ ++I +F + L ++ +A G A G+ A D++ KA + P + +
Sbjct: 118 GRFDEAISHFQEGLALASQDVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHGN 177
Query: 86 YTMLLNSLELFKESVEILKNVSESDDKIIEI---LGDAYLKTGKFNEAILQYNNILERKP 142
L + + ++V + E+ +G A K G+ EA + +E P
Sbjct: 178 LGGALFAAGRWADAVGAWGRALALEPNHAEVRADMGVALAKLGRQEEAAECFRRAMELDP 237
Query: 143 RYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFY 202
G AL L + ++A EIY KV+ ++P N G F + + ++A+ Y
Sbjct: 238 GNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQAVASY 297
Query: 203 DMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWC-----RVGLLY 257
D L + L++G AL + G+ +ALD + L + + C R +
Sbjct: 298 DRVLELDPANGPAWLNRGKALYEAGRVEDALDSFRSALRLMPDDADALCELVNLRKVICD 357
Query: 258 YDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLR 295
+D + E A+ ++A+ + ++P + + + T + R
Sbjct: 358 WDGLEAEEALCRRQVADGKAGIDPQVFMSIPATPAEQR 395
Score = 60.5 bits (145), Expect = 2e-13
Identities = 63/336 (18%), Positives = 125/336 (37%), Gaps = 37/336 (11%)
Query: 50 YFKGNAYHMLGKSKLAQDSYEKALSIRPNDLEIIKSYTMLLNSLELFKESVEILKNVSE- 108
+ + A H G +A+ Y L+ P +E + +Y +LL +S++ L +
Sbjct: 6 FARAQAEHRSGNFAVAEPLYGAILAASPEHVEALYAYGVLLAQTGRLPQSLDHLSRAARL 65
Query: 109 --SDDKIIEILGDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALE 166
D +I G+ E+ ++ + +R+P E G + +FDEA+
Sbjct: 66 APEDGRIGRNFALVLQAAGRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQGRFDEAIS 125
Query: 167 IYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKL 226
+++ L ++ D E N+G A R
Sbjct: 126 HFQEGLALASQDVEARCNLGLA----------------------------------CRAA 151
Query: 227 GKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVK 286
G+ +EA+D + K E + +G + + A+ A P + +
Sbjct: 152 GRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAVGAWGRALALEPNHAEVRAD 211
Query: 287 LGRTYVKLRNYNKGLEFMEKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISINK 346
+G KL + E +A++ D G L L R +A + Y K I++
Sbjct: 212 MGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAP 271
Query: 347 NDSKFWMHLSNVYKTIGKEDYSKEAYENAVNLENHN 382
+ + M+ ++K +G+ D + +Y+ + L+ N
Sbjct: 272 DHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPAN 307
Score = 48.1 bits (113), Expect = 9e-10
Identities = 35/164 (21%), Positives = 68/164 (41%), Gaps = 31/164 (18%)
Query: 17 ETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIR 76
+ G G+ +++ E F + + +P NP Y G A LG+ + A + Y K +++
Sbjct: 211 DMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVA 270
Query: 77 PNDLEIIKSYTMLLNSLELFKESVEILKNVSESDDKIIEILGDAYLKTGKFNEAILQYNN 136
P+ + +NS +FK K G+ ++A+ Y+
Sbjct: 271 PDHA------SAHMNSGVIFK-------------------------KLGQPDQAVASYDR 299
Query: 137 ILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTE 180
+LE P +G AL + ++AL+ + L++ P D +
Sbjct: 300 VLELDPANGPAWLNRGKALYEAGRVEDALDSFRSALRLMPDDAD 343
Score = 40.4 bits (93), Expect = 2e-07
Identities = 17/68 (25%), Positives = 37/68 (54%)
Query: 16 LETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSI 75
+ +G + G+ +++ +++ L +P N AW +G A + G+ + A DS+ AL +
Sbjct: 278 MNSGVIFKKLGQPDQAVASYDRVLELDPANGPAWLNRGKALYEAGRVEDALDSFRSALRL 337
Query: 76 RPNDLEII 83
P+D + +
Sbjct: 338 MPDDADAL 345