Pairwise Alignments

Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 221 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 44/213 (20%), Positives = 92/213 (43%), Gaps = 7/213 (3%)

Query: 70  EKALSIRPNDL---EIIKSYTMLLNSLELFKESVEILKNVSESDDKIIEIL----GDAYL 122
           E  +S +P+D+     + ++  L  + +L    V+  +     +D I ++     G ++ 
Sbjct: 2   ENTMSSKPSDILDEVTLYAHYGLSVAKKLGMNMVDAFRAAFSVNDDIRQVYYRDKGISHA 61

Query: 123 KTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVW 182
           K G++++A++    + +      ++    G A V     D   E+ E+ L  +P + +V 
Sbjct: 62  KAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVA 121

Query: 183 KNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEK 242
             +G  +  V+KY+ A+         +  +F V    G AL  LG+ +EA+D +   L  
Sbjct: 122 TVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGL 181

Query: 243 HIQNYEPWCRVGLLYYDTEDYETAIYYLELANE 275
                +    +   Y     +E A+ + + ANE
Sbjct: 182 RPNEGKVHRAIAFSYEQMGRHEEALPHFKKANE 214



 Score = 50.8 bits (120), Expect = 4e-11
 Identities = 36/156 (23%), Positives = 66/156 (42%)

Query: 194 KYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRV 253
           +Y +A+   +   +    D  V L  G A  K G  +   +L  + L     N +    +
Sbjct: 65  RYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVL 124

Query: 254 GLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSE 313
           GL Y   + Y+ A+  L    E NP+N ++  +LG     L  +++ ++  + AL     
Sbjct: 125 GLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPN 184

Query: 314 YAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDS 349
             K      +    + RH EA+  +KKA  +++  S
Sbjct: 185 EGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGAS 220



 Score = 38.1 bits (87), Expect = 2e-07
 Identities = 23/93 (24%), Positives = 43/93 (46%)

Query: 19  GTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPN 78
           G  Y    KY  ++    K   + P N +  +  G A   LG+   A DS++ AL +RPN
Sbjct: 125 GLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPN 184

Query: 79  DLEIIKSYTMLLNSLELFKESVEILKNVSESDD 111
           + ++ ++       +   +E++   K  +E D+
Sbjct: 185 EGKVHRAIAFSYEQMGRHEEALPHFKKANELDE 217