Pairwise Alignments
Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 758 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1
Score = 58.5 bits (140), Expect = 6e-13
Identities = 64/332 (19%), Positives = 122/332 (36%), Gaps = 3/332 (0%)
Query: 50 YFKGNAYHMLGKSKLAQDSYEKALSIRPNDLEIIKSYTMLLNSLELFKESVEILKNVSES 109
+ K H G+ A + Y++ L P D + + + F ++ ++ +
Sbjct: 34 FAKAVELHQAGRLLEAVEIYQRILVANPYDEGANHLLGVACSQMGQFDLAIHLIGEAIRA 93
Query: 110 DDKIIEI---LGDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALE 166
+D++ + LG+A + + EA Y L E L G L + +E+LE
Sbjct: 94 NDRVPDYHVNLGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLE 153
Query: 167 IYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKL 226
++ L + P E N+ + + +A++ + E G+ + G AL
Sbjct: 154 FHQSALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQADLGRALLAS 213
Query: 227 GKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVK 286
G EA + L + + E A+ + A E P P ++
Sbjct: 214 GHRIEADVAVCRALRLAPDSPPILVAAADVIRARGRMEEALEHAARAAELAPNYPPAVLM 273
Query: 287 LGRTYVKLRNYNKGLEFMEKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISINK 346
L R + + E + + LN + R EA+ Y+ ++
Sbjct: 274 LARQLRAMGRRDLSAETYLRLAGIEGAGVAHLFDAANALNEMSRLPEAVALYQALLAREH 333
Query: 347 NDSKFWMHLSNVYKTIGKEDYSKEAYENAVNL 378
+ S+ W +L N + +G+ D + E YE A L
Sbjct: 334 DHSEVWNNLGNALRELGELDRAAECYETAERL 365
Score = 57.8 bits (138), Expect = 1e-12
Identities = 55/276 (19%), Positives = 114/276 (41%), Gaps = 3/276 (1%)
Query: 12 PKKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEK 71
P + G ++S + ++ + + L P+A + GN G+ + + + ++
Sbjct: 98 PDYHVNLGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLEFHQS 157
Query: 72 ALSIRPNDLEIIKSYTMLLNSLELFKESVEILKN-VSE--SDDKIIEILGDAYLKTGKFN 128
AL++RPN +E + + +L+ L E+VE L+ V+E + + LG A L +G
Sbjct: 158 ALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQADLGRALLASGHRI 217
Query: 129 EAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNA 188
EA + L P IL + + +EALE + +++P +
Sbjct: 218 EADVAVCRALRLAPDSPPILVAAADVIRARGRMEEALEHAARAAELAPNYPPAVLMLARQ 277
Query: 189 FYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYE 248
+ + + + + Y +AL ++ + EA+ LY +L + + E
Sbjct: 278 LRAMGRRDLSAETYLRLAGIEGAGVAHLFDAANALNEMSRLPEAVALYQALLAREHDHSE 337
Query: 249 PWCRVGLLYYDTEDYETAIYYLELANERNPLNPSIL 284
W +G + + + A E A +P +P ++
Sbjct: 338 VWNNLGNALRELGELDRAAECYETAERLSPDDPVVM 373
Score = 50.4 bits (119), Expect = 2e-10
Identities = 65/320 (20%), Positives = 116/320 (36%), Gaps = 39/320 (12%)
Query: 12 PKKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEK 71
P+ L G +G+ ++S+E+ L P +A LG+ A + +
Sbjct: 132 PEALFGLGNTLAQTGRLEESLEFHQSALALRPNFVEALANMAGVLSRLGRPAEAVEKLRR 191
Query: 72 ALSIRPNDLEIIKSY-TMLLNSLELFKESVEILKNVSESDDK--IIEILGDAYLKTGKFN 128
A++ RP + + LL S + V + + + + D I+ D G+
Sbjct: 192 AVAERPGEASLQADLGRALLASGHRIEADVAVCRALRLAPDSPPILVAAADVIRARGRME 251
Query: 129 EAILQYNNILERKPRY----------------KEILAKKGTALVGLK------------- 159
EA+ E P Y +++ A+ L G++
Sbjct: 252 EALEHAARAAELAPNYPPAVLMLARQLRAMGRRDLSAETYLRLAGIEGAGVAHLFDAANA 311
Query: 160 -----KFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFG 214
+ EA+ +Y+ +L +EVW N+GNA + + ++A + Y+ D
Sbjct: 312 LNEMSRLPEAVALYQALLAREHDHSEVWNNLGNALRELGELDRAAECYETAERLSPDDPV 371
Query: 215 VTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELAN 274
V ++ L LG+ EA L KV+ P +G Y E A + A
Sbjct: 372 VMSNRAALLGSLGRVAEAEILCRKVVALQPGIGIPLSNLGQALYAQGRMEEAREQFDAAG 431
Query: 275 ERNPLNPSILVKLGRTYVKL 294
+ N I + R V+L
Sbjct: 432 AADSTNDDI--RFHRAIVRL 449
Score = 47.0 bits (110), Expect = 2e-09
Identities = 70/354 (19%), Positives = 144/354 (40%), Gaps = 17/354 (4%)
Query: 21 EYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPNDL 80
E + +G+ +++E + + L + P + A + G A +G+ LA +A IR ND
Sbjct: 39 ELHQAGRLLEAVEIYQRILVANPYDEGANHLLGVACSQMGQFDLAIHLIGEA--IRANDR 96
Query: 81 EIIKSYTM-----LLNSLELFKESVEILKNVSESDD--KIIEILGDAYLKTGKFNEAILQ 133
+ Y + L +S L + + ++ + D + + LG+ +TG+ E++
Sbjct: 97 --VPDYHVNLGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLEF 154
Query: 134 YNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVK 193
+ + L +P + E LA L L + EA+E + + P + + ++G A
Sbjct: 155 HQSALALRPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQADLGRALLASG 214
Query: 194 KYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRV 253
+A L + ++ D +R G+ EAL+ + E NY P +
Sbjct: 215 HRIEADVAVCRALRLAPDSPPILVAAADVIRARGRMEEALEHAARAAEL-APNYPPAVLM 273
Query: 254 ---GLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDK 310
L D +A YL LA + L ++ + + + L +
Sbjct: 274 LARQLRAMGRRDL-SAETYLRLAGIEGA-GVAHLFDAANALNEMSRLPEAVALYQALLAR 331
Query: 311 DSEYAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGK 364
+ ++++ W G L L A +CY+ A ++ +D + + + ++G+
Sbjct: 332 EHDHSEVWNNLGNALRELGELDRAAECYETAERLSPDDPVVMSNRAALLGSLGR 385
Score = 42.0 bits (97), Expect = 6e-08
Identities = 48/257 (18%), Positives = 96/257 (37%)
Query: 123 KTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVW 182
+ G+ EA+ Y IL P + G A + +FD A+ + + ++ + +
Sbjct: 42 QAGRLLEAVEIYQRILVANPYDEGANHLLGVACSQMGQFDLAIHLIGEAIRANDRVPDYH 101
Query: 183 KNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEK 242
N+GNA ++ ++ +A Y L + G+ L + G+ E+L+ + L
Sbjct: 102 VNLGNALFSSRRLPEAEAAYRRALTLNTDIPEALFGLGNTLAQTGRLEESLEFHQSALAL 161
Query: 243 HIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLE 302
E + + A+ L A P S+ LGR + + +
Sbjct: 162 RPNFVEALANMAGVLSRLGRPAEAVEKLRRAVAERPGEASLQADLGRALLASGHRIEADV 221
Query: 303 FMEKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTI 362
+ +AL + ++ R EA++ +A + N + L+ + +
Sbjct: 222 AVCRALRLAPDSPPILVAAADVIRARGRMEEALEHAARAAELAPNYPPAVLMLARQLRAM 281
Query: 363 GKEDYSKEAYENAVNLE 379
G+ D S E Y +E
Sbjct: 282 GRRDLSAETYLRLAGIE 298
Score = 40.4 bits (93), Expect = 2e-07
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 3/158 (1%)
Query: 15 LLETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALS 74
L + + +++ + L E + + W GNA LG+ A + YE A
Sbjct: 305 LFDAANALNEMSRLPEAVALYQALLAREHDHSEVWNNLGNALRELGELDRAAECYETAER 364
Query: 75 IRPNDLEIIKSYTMLLNSLELFKESVEILKNVSESDDKI---IEILGDAYLKTGKFNEAI 131
+ P+D ++ + LL SL E+ + + V I + LG A G+ EA
Sbjct: 365 LSPDDPVVMSNRAALLGSLGRVAEAEILCRKVVALQPGIGIPLSNLGQALYAQGRMEEAR 424
Query: 132 LQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYE 169
Q++ +I + + L F E +YE
Sbjct: 425 EQFDAAGAADSTNDDIRFHRAIVRLMLGDFAEGWPLYE 462