Pairwise Alignments

Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 468 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  113 bits (283), Expect = 1e-29
 Identities = 89/374 (23%), Positives = 163/374 (43%), Gaps = 41/374 (10%)

Query: 11  DPKKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYE 70
           D ++L +    Y+++ K++K+++     L   P + +     G       + +   +  E
Sbjct: 32  DEEELEDIIRYYFDTQKFKKALKASKLALERFPFSIEIKLMYGQCLIFNDELEEGLEVLE 91

Query: 71  KALSIRPNDLEIIKSYT--MLLNSLELFKESVEILKN---VSESDDKIIEILGDAYLKTG 125
              ++ PN+ EI+ + +  +LLN     KE+++IL++   ++E   +I   LG+ Y    
Sbjct: 92  NINNLSPNNEEIVLALSNGLLLNGS--VKEAIQILEDFLPMAEDKAEIYYSLGNFYRAEN 149

Query: 126 KFNEAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNI 185
              +AI  Y N ++ K  +++ L +          FDE L+ Y++ +   PY  E W N+
Sbjct: 150 NTEKAIFHYKNAVKLKINHEDALFQLAMITEEEGSFDEILQFYQEFIDQDPYSAEAWYNL 209

Query: 186 GNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQ 245
           G  +  + +YE+AI  YD  L           + G+AL    +  +A + Y   +     
Sbjct: 210 GVVYNRLGRYEEAINAYDYALIIDDSFASAYFNMGNALMNTQQYEKATEAYLNTINSEGA 269

Query: 246 NYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFME 305
           N E  C                 YL  A E                 KL   +K   + +
Sbjct: 270 NSENCC-----------------YLAAAFE-----------------KLDQMDKAFTYFK 295

Query: 306 KALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISINKNDSKFWMHLSNVYKTIGKE 365
           K+   D EY  AW   G  +   ++ +EAI  +KKA+ ++  ++ +W+ L++    +G  
Sbjct: 296 KSAKLDPEYDDAWFGLGMCMLKKDKFFEAIHYFKKALKLSSVNANYWVGLADAEYHLGNL 355

Query: 366 DYSKEAYENAVNLE 379
             S EAYE A+NLE
Sbjct: 356 QASSEAYEEAINLE 369



 Score = 77.0 bits (188), Expect = 1e-18
 Identities = 57/291 (19%), Positives = 125/291 (42%), Gaps = 37/291 (12%)

Query: 26  GKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPNDLEIIKS 85
           G + + ++++ + ++ +P + +AWY  G  Y+ LG+ + A ++Y+ AL I  +      +
Sbjct: 183 GSFDEILQFYQEFIDQDPYSAEAWYNLGVVYNRLGRYEEAINAYDYALIIDDSFASAYFN 242

Query: 86  YTMLLNSLELFKESVEILKNVSESDDKIIE---ILGDAYLKTGKFNEAILQYNNILERKP 142
               L + + ++++ E   N   S+    E    L  A+ K  + ++A   +    +  P
Sbjct: 243 MGNALMNTQQYEKATEAYLNTINSEGANSENCCYLAAAFEKLDQMDKAFTYFKKSAKLDP 302

Query: 143 RYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFY 202
            Y +     G  ++   KF EA+  ++K LK+S  +   W  + +A Y +   + + + Y
Sbjct: 303 EYDDAWFGLGMCMLKKDKFFEAIHYFKKALKLSSVNANYWVGLADAEYHLGNLQASSEAY 362

Query: 203 DMYLNEHKGDFGVTLSKGDALRKLGKTNEALDLYTKVLEKHIQNYEPWCRVGLLYYDTED 262
           +                           EA++L   ++E ++        + ++Y+D   
Sbjct: 363 E---------------------------EAINLEPGLMETYVN-------LSIIYFDQNR 388

Query: 263 YETAIYYLELANERNPLNPSILVKLGRTYVKLRNYNKGLEFMEKALDKDSE 313
           +E AI  L+   +  P +  +  +L    +K   Y +   ++E AL  D E
Sbjct: 389 FEEAIDVLKEGIDELPEDAELYYRLVVYLIKTGKYKEAFSYLENALTLDFE 439



 Score = 32.7 bits (73), Expect = 2e-05
 Identities = 24/97 (24%), Positives = 41/97 (42%)

Query: 23  YNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDSYEKALSIRPNDLEI 82
           Y+ G  Q S E + + +N EP   + +      Y    + + A D  ++ +   P D E+
Sbjct: 350 YHLGNLQASSEAYEEAINLEPGLMETYVNLSIIYFDQNRFEEAIDVLKEGIDELPEDAEL 409

Query: 83  IKSYTMLLNSLELFKESVEILKNVSESDDKIIEILGD 119
                + L     +KE+   L+N    D +  EIL D
Sbjct: 410 YYRLVVYLIKTGKYKEAFSYLENALTLDFERHEILYD 446