Pairwise Alignments

Query, 388 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 231 a.a., Tetratricopeptide repeat. from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 57.8 bits (138), Expect = 3e-13
 Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 2/180 (1%)

Query: 175 SPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGDALRKLGKTNEALD 234
           SP + E++ + G     ++K+ +AI ++D  + ++        +KG A  + GK +EA+ 
Sbjct: 9   SPSEQELY-DAGIKEMRLEKFNEAITYFDRVIEQNPDHTEAHNAKGVAFFEQGKWDEAIK 67

Query: 235 LYTKVLEKHIQNYEPWCRVGLLYYDTEDYETAIYYLELANERNPLNPSILVKLGRTYVKL 294
            +   +EK   +Y+P+  +G  Y + + ++ A+    +A+  +P    I    G   + +
Sbjct: 68  HFKVAMEKDSTSYKPYLNLGNAYLEKKAFKDAVINYNMASSLDPNQTDIYYNRGLALLGM 127

Query: 295 RNYNKGLEFMEKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAISI-NKNDSKFWM 353
             Y   +   + AL  D   A     +   L       EAI+  K++++I N N + F++
Sbjct: 128 EAYEDAILDFDNALQVDPNQALVHFNRAKALIGNNNPLEAINALKRSVAIDNTNGAAFYL 187



 Score = 54.7 bits (130), Expect = 3e-12
 Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 31/180 (17%)

Query: 9   SKDPKKLLETGTEYYNSGKYQKSIEYFNKTLNSEPKNPDAWYFKGNAYHMLGKSKLAQDS 68
           S   ++L + G +     K+ ++I YF++ +   P + +A   KG A+   GK   A   
Sbjct: 9   SPSEQELYDAGIKEMRLEKFNEAITYFDRVIEQNPDHTEAHNAKGVAFFEQGKWDEAIKH 68

Query: 69  YEKALSIRPNDLEIIKSYTMLLNSLELFKESVEILKNVSESDDKIIEILGDAYLKTGKFN 128
           ++ A+       +   SY   LN                         LG+AYL+   F 
Sbjct: 69  FKVAME------KDSTSYKPYLN-------------------------LGNAYLEKKAFK 97

Query: 129 EAILQYNNILERKPRYKEILAKKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNA 188
           +A++ YN      P   +I   +G AL+G++ +++A+  ++  L++ P    V  N   A
Sbjct: 98  DAVINYNMASSLDPNQTDIYYNRGLALLGMEAYEDAILDFDNALQVDPNQALVHFNRAKA 157



 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 32/132 (24%), Positives = 68/132 (51%), Gaps = 1/132 (0%)

Query: 102 ILKNVSESDDKIIEILGDAYLKTGKFNEAILQYNNILERKPRYKEILAKKGTALVGLKKF 161
           +L + S S+ ++ +  G   ++  KFNEAI  ++ ++E+ P + E    KG A     K+
Sbjct: 4   LLWSCSPSEQELYDA-GIKEMRLEKFNEAITYFDRVIEQNPDHTEAHNAKGVAFFEQGKW 62

Query: 162 DEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEHKGDFGVTLSKGD 221
           DEA++ ++  ++      + + N+GNA+   K ++ A+  Y+M  +       +  ++G 
Sbjct: 63  DEAIKHFKVAMEKDSTSYKPYLNLGNAYLEKKAFKDAVINYNMASSLDPNQTDIYYNRGL 122

Query: 222 ALRKLGKTNEAL 233
           AL  +    +A+
Sbjct: 123 ALLGMEAYEDAI 134



 Score = 46.6 bits (109), Expect = 7e-10
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 5/141 (3%)

Query: 93  LELFKESVEILKNVSESDDKIIEI---LGDAYLKTGKFNEAILQYNNILERKPRYKEILA 149
           LE F E++     V E +    E     G A+ + GK++EAI  +   +E+     +   
Sbjct: 25  LEKFNEAITYFDRVIEQNPDHTEAHNAKGVAFFEQGKWDEAIKHFKVAMEKDSTSYKPYL 84

Query: 150 KKGTALVGLKKFDEALEIYEKVLKISPYDTEVWKNIGNAFYTVKKYEKAIQFYDMYLNEH 209
             G A +  K F +A+  Y     + P  T+++ N G A   ++ YE AI  +D  L   
Sbjct: 85  NLGNAYLEKKAFKDAVINYNMASSLDPNQTDIYYNRGLALLGMEAYEDAILDFDNALQVD 144

Query: 210 KGDFGVTLSKGDALRKLGKTN 230
                V  ++  AL  +G  N
Sbjct: 145 PNQALVHFNRAKAL--IGNNN 163



 Score = 33.5 bits (75), Expect = 6e-06
 Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 284 LVKLGRTYVKLRNYNKGLEFMEKALDKDSEYAKAWCYKGYILNLLERHYEAIDCYKKAIS 343
           L   G   ++L  +N+ + + ++ ++++ ++ +A   KG       +  EAI  +K A+ 
Sbjct: 15  LYDAGIKEMRLEKFNEAITYFDRVIEQNPDHTEAHNAKGVAFFEQGKWDEAIKHFKVAME 74

Query: 344 INKNDSKFWMHLSNVYKTIGKEDYSKEAYENAVNLENHNM 383
            +    K +++L N Y         K+A+++AV   N+NM
Sbjct: 75  KDSTSYKPYLNLGNAY-------LEKKAFKDAV--INYNM 105