Pairwise Alignments

Query, 339 a.a., homoisocitrate dehydrogenase from Methanococcus maripaludis S2

Subject, 370 a.a., 3-isopropylmalate dehydrogenase from Xanthobacter sp. DMC5

 Score =  159 bits (403), Expect = 8e-44
 Identities = 121/315 (38%), Positives = 169/315 (53%), Gaps = 34/315 (10%)

Query: 4   TPKICVINGDGIGNEVVPETVRVLN-----ELGDFEFIHAHAGYECFKRCGDAIPENTIE 58
           T K+ ++ GDGIG EV+ E  RV        L  F       G   +   G AI E  + 
Sbjct: 3   THKLLLLAGDGIGPEVMAEVKRVAQWLEQAGLASFAIEEDLVGGCAYDAHGVAISEAAMV 62

Query: 59  IAKESDCILFGSVTTPKPTELKNKSY-RSPILTLRKELDLYANIRPTYNF---------- 107
            AK +D IL G+V  PK  ++  ++   + +L LRK+L L+AN+RP   +          
Sbjct: 63  RAKGADAILLGAVGGPKWADVPYEARPEAGLLRLRKDLQLFANLRPAICYPALADASSLK 122

Query: 108 ----DNLDFVIIRENTEGLYV--KKEYYDEKN--EVAIAERIISKFGSSRIVKFAFDYAV 159
               + LD +I+RE T G+Y    K   D  N  + AI  ++   +   RI   AF+ A 
Sbjct: 123 REVVEGLDLLIVRELTGGVYFGEPKTITDLGNGQKRAIDTQVYDTYEIERIAAVAFELA- 181

Query: 160 QNNRKKVSCIHKANVLRVTDGLFLEVFEEMSKHYEKLGIKSDDYLIDATAMYLIRNPQMF 219
           +  R KV+   K NV+R +  L+ +V  ++     K  ++ +  L D+ AM L+R P+ +
Sbjct: 182 RTRRNKVTSAEKHNVMR-SGVLWKQVVTDLHARAYK-DVELEHALADSLAMQLVRWPKQY 239

Query: 220 DVLVTTNLFGDILSDEAAGLIGGLGMSPSANI-------GDKNGLFEPVHGSAPDIAGKG 272
           DV+VT NLFGDILSD AA   G LGM PSA++       G +  L+EPVHGSAPDIAGKG
Sbjct: 240 DVIVTDNLFGDILSDLAAMATGSLGMLPSASLGAVDPATGKRAALYEPVHGSAPDIAGKG 299

Query: 273 ISNPIATILSAAMML 287
           I+NPIA I S AM L
Sbjct: 300 IANPIAMIGSLAMAL 314