Pairwise Alignments

Query, 339 a.a., homoisocitrate dehydrogenase from Methanococcus maripaludis S2

Subject, 361 a.a., D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) from Variovorax sp. SCN45

 Score =  193 bits (490), Expect = 6e-54
 Identities = 125/363 (34%), Positives = 188/363 (51%), Gaps = 35/363 (9%)

Query: 3   NTPKICVINGDGIGNEVVPETVRVLNELG-----DFEFIHAH-AGYECFKRCGDAIPENT 56
           +T +I VI GDGIG E +PE +RVL         D +F H   + ++ +++ G  +P+N 
Sbjct: 2   STQRIAVIAGDGIGKETMPEGLRVLEAAATRFGIDLKFDHFDFSSWDYYEKHGQMLPDNW 61

Query: 57  IEIAKESDCILFGSVTTPKPTELKNKSYRSPILTLRKELDLYANIRPTYNFDNL------ 110
            +     D I FG+V  P+     + S    +L  R+E D Y N+RP      +      
Sbjct: 62  KDQIGGHDAIFFGAVGWPEKIP-DHVSLWGSLLMFRREFDQYINLRPARLMPGIIAPVVR 120

Query: 111 -----------DFVIIRENTEGLYVK---KEYYDEKNEVAIAERIISKFGSSRIVKFAFD 156
                      D  I+RENTEG Y     + Y     E+ + E ++S+ G  R++KFAF+
Sbjct: 121 RDGTPREPGEIDMYIVRENTEGEYSSIGGRMYQGTPREIVVQETVMSRVGVDRVLKFAFE 180

Query: 157 YAVQNNRKKVSCIHKANVLRVTDGLFLEVFEEMSKHYEKLGIKSDDYLIDATAMYLIRNP 216
            A    +K ++   K+N + +T   + E   EM K Y   GI  D + ID    + ++ P
Sbjct: 181 LAQSRPKKHLTSATKSNGISITMPYWDERVAEMGKSYP--GITLDKFHIDILTAHFVQRP 238

Query: 217 QMFDVLVTTNLFGDILSDEAAGLIGGLGMSPSANIGDKN---GLFEPVHGSAPDIAGKGI 273
             FDV+V +NLFGDILSD      G +G++PSAN+  +     LFEPVHGSAPDIAGKGI
Sbjct: 239 DFFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTTPSLFEPVHGSAPDIAGKGI 298

Query: 274 SNPIATILSAAMMLDHLKMNKEAEYIRKAVKKTVECKY---LTPDLGGNLKTFEVTEKII 330
           +NPI  I   AMML+ L   +  + I   ++K +  +     TPD+GG   T ++ + I 
Sbjct: 299 ANPIGQIWCGAMMLEFLGHKQAHDAILSTIEKVLAPQSGAPRTPDIGGKASTSDLGKAIA 358

Query: 331 ESI 333
            ++
Sbjct: 359 AAL 361