Pairwise Alignments

Query, 339 a.a., homoisocitrate dehydrogenase from Methanococcus maripaludis S2

Subject, 362 a.a., Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  176 bits (445), Expect = 1e-48
 Identities = 120/360 (33%), Positives = 188/360 (52%), Gaps = 31/360 (8%)

Query: 4   TPKICVINGDGIGNEVVPETVRVLNELGD------FEFIHAHAGYECFKRCGDAIPENTI 57
           T  I  I GDGIG EVVP   +VL  L        F+F     G + ++  G+ +P + +
Sbjct: 3   TYAIATIPGDGIGKEVVPAGQQVLEALAATSHTFRFQFEDFDWGGDYYREHGEMMPADGL 62

Query: 58  EIAKESDCILFGSVTTPK-PTELKNKSYRSPILTLRKELDLYANIRPTY----------- 105
           +  ++ D ILFGS   P  P  +     R   L + +  D YAN+RPT            
Sbjct: 63  DALRDKDAILFGSAGDPHIPDHITLWGLR---LKICQGFDQYANVRPTRILPGIDAPLKR 119

Query: 106 -NFDNLDFVIIRENTEGLYVK---KEYYDEKNEVAIAERIISKFGSSRIVKFAFDYAVQN 161
              ++L++VI+REN+EG Y     + +     E A    ++++ G  RI++FAF  A   
Sbjct: 120 CKAEDLNWVIVRENSEGEYAGVGGRVHQGHPIEAATDVTMMTRVGVERIMRFAFKLAQSR 179

Query: 162 NRKKVSCIHKANVLRVTDGLFLEVFEEMSKHYEKLGIKSDDYLIDATAMYLIRNPQMFDV 221
            RK+++ I K+N  R    ++ E+  +++K +    +  D  L+DA    ++  P   D 
Sbjct: 180 PRKQLTVITKSNAQRHAMVMWDEIAVQIAKEFPD--VTWDKELVDAATARMVNRPATLDT 237

Query: 222 LVTTNLFGDILSDEAAGLIGGLGMSPSANIGDKN---GLFEPVHGSAPDIAGKGISNPIA 278
           +V TNL  DILSD AA L G LG++P+ NI  ++    +FEP+HGSA DI GKG++NP+ 
Sbjct: 238 IVATNLHADILSDLAAALAGSLGIAPTGNIDPEHRYPSMFEPIHGSAFDIMGKGLANPVG 297

Query: 279 TILSAAMMLDHLKMNKEAEYIRKAVKK-TVECKYLTPDLGGNLKTFEVTEKIIESIRSQM 337
           T  S  M+L+HL     A  + +AV++ T      T DLGG   T +VT+ + E + + +
Sbjct: 298 TFWSCVMLLEHLGEFDAALRLMQAVEQVTANPALHTGDLGGKATTAQVTQAVCELLTASL 357