Pairwise Alignments

Query, 533 a.a., S-layer protein from Methanococcus maripaludis S2

Subject, 575 a.a., S-layer protein from Methanococcus maripaludis S2

 Score =  385 bits (990), Expect = e-111
 Identities = 240/579 (41%), Positives = 345/579 (59%), Gaps = 50/579 (8%)

Query: 1   MAISIKKIVSIGLGGLMLGSTFCSGAFAVEKVGDVDSFVSDIVSGNNSNIDIIVGSNSVA 60
           MA+S+KKI +I +GG M+ S   +GAFA EKVGDVD+F +D+V+  N+N+DI+VGSN+ A
Sbjct: 1   MAMSMKKIGAIAVGGAMVASALATGAFAAEKVGDVDAFAADVVADGNANVDIVVGSNAAA 60

Query: 61  SDVVSAANIAAKIGSLSFLEQNGKSAAATLSIASKSKSEEFNLIGS-------GVTDSLF 113
            DVVSAAN+AAKIGSL F E   +  +A +++++ ++S+E   + +       G   +L 
Sbjct: 61  LDVVSAANVAAKIGSLMFKEGTVEDGSAQITVSASAESDEIKDLWATAPAAIAGQDKALV 120

Query: 114 AVSADDDYLSIITN----AD-FHSSTNLDATGY------VSLEDLGNLMEISDTDPSSW- 161
             + DDDY ++ T     AD   + T L+  G       V LEDL  LM + D DPS W 
Sbjct: 121 ITAPDDDYTAVATGILGFADGVPAGTGLNLFGITTADAAVDLEDLQTLMIVEDADPSGWD 180

Query: 162 FTGSDNDV-SAEFLFLRLKSDAT-----------NWKVNSDEMSY--MALLLDENLGVPG 207
           F G+ ND  +AE L   + ++ T           + +V  DE+ Y  +A + D+     G
Sbjct: 181 FYGTGNDFEAAEVLVAVVNTETTVPASTFGVGTPDLEVLEDEVVYASLAFVEDQYGNAAG 240

Query: 208 GLKCMSPGRNIVYLGEEWTLMGMNADADKVSMGKEVYRGTLKEGKSYFV-NGYEIKIDSI 266
               + PG  I  LG+E  ++ ++ D D   +G E Y G +K+G SY V NGY +KI ++
Sbjct: 241 DYAALFPGMRIPLLGQEMVVVKLDTDDDLAIVGTEAYEGVIKQGDSYDVGNGYTVKIANV 300

Query: 267 ITDS-TNYKVSAKILKDGTVVKSAYDT-----AP-----LNLISNGIGIRFQKVYESIDS 315
           +  S T YKV  ++LKDG VV S +DT     AP     L L+   +GI     +  +  
Sbjct: 301 LKQSGTAYKVDVQLLKDGKVVASKFDTVDKPAAPAAATQLKLVYKDMGIVVNAAWTDVGD 360

Query: 316 NAAYADVVIVNSVKGMELGSEVIPDYEIYSVLYTGGTFRYTDDFLKGQKNMGLALKYVGD 375
           N  YA++VI ++V  MELG E IPDYE Y+V  T      +D        +G+ALKYVGD
Sbjct: 361 NYGYAELVIADNVVEMELGEEFIPDYEAYTVDLTAAGLTLSDKATAAGTIVGIALKYVGD 420

Query: 376 DLTGLGSDDTVEIANYANFLFD-DEGKSATTLSVFFEMNEEKEVSIIQNQKAKVLNVEVI 434
           D+  +  D T  IA+YA   FD D GK    +++ F M+E K+V+I   +K  VLN E+ 
Sbjct: 421 DVDKISKDKTFTIADYAKLDFDEDSGK----IALKFLMDESKDVNINIGEKVSVLNAEIK 476

Query: 435 ADKISAESEQSTILNAPVVKLDTETSMESSENPLILVGGPVVNSITEELVNAGLFAIDDD 494
              I AE++++ ++ AP+  LD+E S+++++  LILVGGPVVN++T EL +AGL AID++
Sbjct: 477 LADIEAEAKEAVVMTAPIAVLDSEASLDAADKGLILVGGPVVNALTAELADAGLVAIDNE 536

Query: 495 SLATLAVVSETANGNDVLIVTGGDRDATAEAANALIAMI 533
           S ATLAV +  ANGNDVL+V GGDR AT EAA ALI M+
Sbjct: 537 SPATLAVAAGAANGNDVLVVAGGDRAATEEAAEALIDML 575