Pairwise Alignments
Query, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 409 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Score = 59.7 bits (143), Expect = 2e-13
Identities = 34/125 (27%), Positives = 66/125 (52%)
Query: 415 ANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGS 474
A++L G++E A YKKAI L+ N + G YL +Y + ++KAV L+
Sbjct: 269 ADSLNRLGEYEKAVLNYKKAIELDSKNPIFWSGLGLSYNYLNEYNSSIQSYEKAVELNPE 328
Query: 475 NSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVK 534
+ +++NL K++ Y+E+ +++K++++ + A L Y LK Y++A+
Sbjct: 329 DDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGLGNSYLLLKNYEKALMCYD 388
Query: 535 SMVKI 539
++I
Sbjct: 389 KAIEI 393
Score = 52.4 bits (124), Expect = 3e-11
Identities = 30/113 (26%), Positives = 59/113 (52%)
Query: 419 YESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKA 478
Y+S + A + ++KA+ LN N + + L L +Y +A + +KKA+ LD N
Sbjct: 239 YKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIELDSKNPIF 298
Query: 479 YNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVA 531
++ L +Y+ + + Y+KA+E+ P+ + NL + K Y+E+++
Sbjct: 299 WSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESIS 351
Score = 50.1 bits (118), Expect = 2e-10
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Query: 419 YESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYG-------EAEIEFKKAVAL 471
Y D+E + + KA+ L+P N+ C LEYL KY AEI F + + L
Sbjct: 35 YLEKDYETSVKCFDKALELDPDNT-------CSLEYLGKYSMENRNLDMAEIYFGRLIEL 87
Query: 472 DGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAV 530
+ N A +L E+YD+A +Y K +EI + L YDE+V
Sbjct: 88 EPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKMLGNYDESV 146
Score = 47.4 bits (111), Expect = 1e-09
Identities = 27/87 (31%), Positives = 47/87 (54%)
Query: 423 DFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNL 482
++ ++ Y+KA+ LNP + ++ G L + Y E+ F+K++ L+ +N A+N L
Sbjct: 311 EYNSSIQSYEKAVELNPEDDISWSNLGYLQYKNKNYNESISYFEKSLDLNSNNKYAWNGL 370
Query: 483 ATFLAKSEKYDEAEEHYKKAIEIAPDY 509
+ Y++A Y KAIEI P Y
Sbjct: 371 GNSYLLLKNYEKALMCYDKAIEIDPLY 397
Score = 45.1 bits (105), Expect = 5e-09
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 454 YLEKYGEAEIE-FKKAVALDGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAA 512
YLEK E ++ F KA+ LD N+ + L + ++ D AE ++ + IE+ P+ A
Sbjct: 35 YLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEIYFGRLIELEPENKCA 94
Query: 513 IYNLAAMYAALKRYDEAVAQVKSMVKIFRSDG 544
+ +L ++ + + YD+A+ +++I S G
Sbjct: 95 LKSLGEIHLSQEEYDKALYYYNKLLEIDNSVG 126
Score = 39.7 bits (91), Expect = 2e-07
Identities = 32/121 (26%), Positives = 53/121 (43%)
Query: 419 YESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKA 478
Y++G+++ A + KA+ L+ N G E E+Y A F KAV D A
Sbjct: 171 YQNGEYDKAIGCFDKALTLDGNLKYSLNGKGLCCEKKEQYTMAVECFDKAVIQDECYYDA 230
Query: 479 YNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVKSMVK 538
N KS+KY A ++KA+++ + A L Y++AV K ++
Sbjct: 231 IYNKGISCYKSKKYSCAISCFEKALDLNNSNPYCYFYKADSLNRLGEYEKAVLNYKKAIE 290
Query: 539 I 539
+
Sbjct: 291 L 291
Score = 36.6 bits (83), Expect = 2e-06
Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 8/186 (4%)
Query: 375 IEEKLETLDELLDKSELESELVE-----EHTYEIDNNEFLEILSFANTLYESGDFEAAKT 429
I E T E+ ++ LE + + E+D + + E+ + + A+
Sbjct: 20 ITESSSTYAEMGEQCYLEKDYETSVKCFDKALELDPDNTCSLEYLGKYSMENRNLDMAEI 79
Query: 430 EYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFLAKS 489
+ + I L P N G + E+Y +A + K + +D S K + L
Sbjct: 80 YFGRLIELEPENKCALKSLGEIHLSQEEYDKALYYYNKLLEIDNSVGKTWFYKGICLKML 139
Query: 490 EKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVKSMVKIFRSDGNIKEV 549
YDE+ E + K+ + +L Y YD+A+ K DGN+K
Sbjct: 140 GNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIG---CFDKALTLDGNLKYS 196
Query: 550 LELKKL 555
L K L
Sbjct: 197 LNGKGL 202
Score = 30.4 bits (67), Expect = 1e-04
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 56 SKYVIFLFSSMYSNENMLDEAKTAFNSDKHIISLKLDDPELKKQISIHQSEFEDNYGLSK 115
SK IF +S + + N L+E ++ S + + L +D + Q + +K
Sbjct: 293 SKNPIF-WSGLGLSYNYLNEYNSSIQSYEKAVELNPEDDISWSNLGYLQYK-------NK 344
Query: 116 KVNDEVEKLKKMEKKGTDFVESQISFN-MGNIYFNFGKYAEAIRCYKKAVKIIPDFVDAL 174
N+ + +K ++ ++ ++N +GN Y Y +A+ CY KA++I P + +
Sbjct: 345 NYNESISYFEKSLDLNSN---NKYAWNGLGNSYLLLKNYEKALMCYDKAIEIDPLYNEPK 401
Query: 175 HNFNSLS 181
+ +S+S
Sbjct: 402 ISKSSIS 408
Score = 28.5 bits (62), Expect = 5e-04
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 115 KKVNDEVEKLKKMEKKGTDFVESQISFN-MGNIYFNFGKYAEAIRCYKKAVKI 166
K + + E ++ +K D+ +++N +G Y+ G+Y +AI C+ KA+ +
Sbjct: 137 KMLGNYDESVEAFDKSTGDYETLFLTWNDLGYCYYQNGEYDKAIGCFDKALTL 189