Pairwise Alignments

Query, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 798 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 61.6 bits (148), Expect = 1e-13
 Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 12/165 (7%)

Query: 380 ETLDELLDKSELESELVEEHTYEIDNNEFLEILSFANTLYESGDFEAAKTEYKKAIALNP 439
           E +D     +EL   L + H             +    L+ +G +  A   + +A+AL P
Sbjct: 156 EAIDAFAKAAELAPALAKAHG------------NLGGALFAAGRWADAVGAWGRALALEP 203

Query: 440 GNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFLAKSEKYDEAEEHY 499
            ++EV    G  L  L +  EA   F++A+ LD  N     NL   L    + ++A E Y
Sbjct: 204 NHAEVRADMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIY 263

Query: 500 KKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVKSMVKIFRSDG 544
            K I +APD+ +A  N   ++  L + D+AVA    ++++  ++G
Sbjct: 264 AKVIAVAPDHASAHMNSGVIFKKLGQPDQAVASYDRVLELDPANG 308



 Score = 46.6 bits (109), Expect = 4e-09
 Identities = 29/131 (22%), Positives = 60/131 (45%)

Query: 402 EIDNNEFLEILSFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEA 461
           E+D        +    L + G  E A   Y K IA+ P ++  H + G + + L +  +A
Sbjct: 234 ELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAPDHASAHMNSGVIFKKLGQPDQA 293

Query: 462 EIEFKKAVALDGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYA 521
              + + + LD +N  A+ N    L ++ + ++A + ++ A+ + PD   A+  L  +  
Sbjct: 294 VASYDRVLELDPANGPAWLNRGKALYEAGRVEDALDSFRSALRLMPDDADALCELVNLRK 353

Query: 522 ALKRYDEAVAQ 532
            +  +D   A+
Sbjct: 354 VICDWDGLEAE 364



 Score = 46.2 bits (108), Expect = 5e-09
 Identities = 29/109 (26%), Positives = 57/109 (52%)

Query: 421 SGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYN 480
           +G  + A   + KA  L P  ++ H + G  L    ++ +A   + +A+AL+ ++++   
Sbjct: 151 AGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAVGAWGRALALEPNHAEVRA 210

Query: 481 NLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEA 529
           ++   LAK  + +EA E +++A+E+ P   A  YNL      L R ++A
Sbjct: 211 DMGVALAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDA 259



 Score = 45.8 bits (107), Expect = 6e-09
 Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 1/140 (0%)

Query: 418 LYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSK 477
           L + G  E A   +++A+ L+PGN     + G  L+ L +  +A   + K +A+   ++ 
Sbjct: 216 LAKLGRQEEAAECFRRAMELDPGNPAHGYNLGRALQDLGRLEDAAEIYAKVIAVAPDHAS 275

Query: 478 AYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVKSMV 537
           A+ N      K  + D+A   Y + +E+ P    A  N         R ++A+   +S +
Sbjct: 276 AHMNSGVIFKKLGQPDQAVASYDRVLELDPANGPAWLNRGKALYEAGRVEDALDSFRSAL 335

Query: 538 KIFRSDGN-IKEVLELKKLI 556
           ++   D + + E++ L+K+I
Sbjct: 336 RLMPDDADALCELVNLRKVI 355



 Score = 44.3 bits (103), Expect = 2e-08
 Identities = 30/134 (22%), Positives = 58/134 (43%)

Query: 410 EILSFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAV 469
           E  + A   + SG+F  A+  Y   +A +P + E    YG LL    +  ++     +A 
Sbjct: 4   ETFARAQAEHRSGNFAVAEPLYGAILAASPEHVEALYAYGVLLAQTGRLPQSLDHLSRAA 63

Query: 470 ALDGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEA 529
            L   + +   N A  L  + +  E+E  + +  +  PD     + L  + +A  R+DEA
Sbjct: 64  RLAPEDGRIGRNFALVLQAAGRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQGRFDEA 123

Query: 530 VAQVKSMVKIFRSD 543
           ++  +  + +   D
Sbjct: 124 ISHFQEGLALASQD 137



 Score = 42.0 bits (97), Expect = 9e-08
 Identities = 31/118 (26%), Positives = 54/118 (45%)

Query: 413 SFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALD 472
           +FA  L  +G    ++ E+ +     P  +E     G ++    ++ EA   F++ +AL 
Sbjct: 75  NFALVLQAAGRLPESEREFGRLRDREPDRAEHRFGLGLVVSAQGRFDEAISHFQEGLALA 134

Query: 473 GSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAV 530
             + +A  NL      + + DEA + + KA E+AP    A  NL     A  R+ +AV
Sbjct: 135 SQDVEARCNLGLACRAAGRLDEAIDAFAKAAELAPALAKAHGNLGGALFAAGRWADAV 192



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 24/120 (20%), Positives = 53/120 (44%)

Query: 411 ILSFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVA 470
           + ++   L ++G    +     +A  L P +  +  ++  +L+   +  E+E EF +   
Sbjct: 39  LYAYGVLLAQTGRLPQSLDHLSRAARLAPEDGRIGRNFALVLQAAGRLPESEREFGRLRD 98

Query: 471 LDGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAV 530
            +   ++    L   ++   ++DEA  H+++ + +A     A  NL     A  R DEA+
Sbjct: 99  REPDRAEHRFGLGLVVSAQGRFDEAISHFQEGLALASQDVEARCNLGLACRAAGRLDEAI 158



 Score = 27.7 bits (60), Expect = 0.002
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 142 NMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDAL 174
           N G   +  G+  +A+  ++ A++++PD  DAL
Sbjct: 313 NRGKALYEAGRVEDALDSFRSALRLMPDDADAL 345



 Score = 25.8 bits (55), Expect = 0.007
 Identities = 10/36 (27%), Positives = 17/36 (47%)

Query: 141 FNMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHN 176
           +N+G    + G+  +A   Y K + + PD   A  N
Sbjct: 244 YNLGRALQDLGRLEDAAEIYAKVIAVAPDHASAHMN 279