Pairwise Alignments

Query, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 548 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 29/96 (30%), Positives = 55/96 (57%)

Query: 422 GDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNN 481
           G  + A T  ++AI L+PG+S  +N+ G  L+  ++  EA    ++ +AL   + + + +
Sbjct: 157 GRLDEAVTCLERAIQLDPGHSMAYNNLGVALQAQDRTEEAISVLERGLALQPDDPELHYS 216

Query: 482 LATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLA 517
           L   L ++ +  +A   Y++AI + PDY AA +NL+
Sbjct: 217 LGCSLQEATRTADATASYRRAIALRPDYGAAHWNLS 252



 Score = 41.6 bits (96), Expect = 8e-08
 Identities = 28/108 (25%), Positives = 46/108 (42%)

Query: 424 FEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLA 483
           F  A   ++K  A  P +   H + G  L  L +  EA    ++   +D S    +N L 
Sbjct: 91  FSDAAANFRKVAAARPDDPVPHYNLGLALRGLGRLDEAAAVLERCRDMDPSVPAPWNVLG 150

Query: 484 TFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVA 531
                  + DEA    ++AI++ P +  A  NL     A  R +EA++
Sbjct: 151 DIRRAQGRLDEAVTCLERAIQLDPGHSMAYNNLGVALQAQDRTEEAIS 198



 Score = 39.3 bits (90), Expect = 4e-07
 Identities = 23/102 (22%), Positives = 44/102 (43%)

Query: 398 EHTYEIDNNEFLEILSFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEK 457
           E   ++D    +   +    L      E A +  ++ +AL P + E+H   GC L+   +
Sbjct: 167 ERAIQLDPGHSMAYNNLGVALQAQDRTEEAISVLERGLALQPDDPELHYSLGCSLQEATR 226

Query: 458 YGEAEIEFKKAVALDGSNSKAYNNLATFLAKSEKYDEAEEHY 499
             +A   +++A+AL      A+ NL+  L +   + E    Y
Sbjct: 227 TADATASYRRAIALRPDYGAAHWNLSHSLLRGGDFSEGWAEY 268



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 26/118 (22%), Positives = 49/118 (41%)

Query: 422 GDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNN 481
           G  + A    ++   ++P      N  G +     +  EA    ++A+ LD  +S AYNN
Sbjct: 123 GRLDEAAAVLERCRDMDPSVPAPWNVLGDIRRAQGRLDEAVTCLERAIQLDPGHSMAYNN 182

Query: 482 LATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVKSMVKI 539
           L   L   ++ +EA    ++ + + PD     Y+L        R  +A A  +  + +
Sbjct: 183 LGVALQAQDRTEEAISVLERGLALQPDDPELHYSLGCSLQEATRTADATASYRRAIAL 240



 Score = 36.6 bits (83), Expect = 3e-06
 Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 1/171 (0%)

Query: 370 NQEVIIEEKLETLDELLDKSELESELVE-EHTYEIDNNEFLEILSFANTLYESGDFEAAK 428
           N  V+++   +   +  +   LE    E E    ID      +    +  +  GD   A 
Sbjct: 2   NNAVLLQSMFQRAVQAFNGGNLEMAAAECERMLGIDRRNTAAMHILGSVAFRRGDPAGAA 61

Query: 429 TEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFLAK 488
               K +  +PG  +     G     L ++ +A   F+K  A    +   + NL   L  
Sbjct: 62  DLLAKVVKQDPGRIQAVITLGEAQLALSRFSDAAANFRKVAAARPDDPVPHYNLGLALRG 121

Query: 489 SEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVKSMVKI 539
             + DEA    ++  ++ P   A    L  +  A  R DEAV  ++  +++
Sbjct: 122 LGRLDEAAAVLERCRDMDPSVPAPWNVLGDIRRAQGRLDEAVTCLERAIQL 172



 Score = 25.0 bits (53), Expect = 0.008
 Identities = 14/72 (19%), Positives = 36/72 (50%), Gaps = 2/72 (2%)

Query: 109 DNYGLSKKVNDEVEKLKKMEKKGTDFV--ESQISFNMGNIYFNFGKYAEAIRCYKKAVKI 166
           +N G++ +  D  E+   + ++G      + ++ +++G       + A+A   Y++A+ +
Sbjct: 181 NNLGVALQAQDRTEEAISVLERGLALQPDDPELHYSLGCSLQEATRTADATASYRRAIAL 240

Query: 167 IPDFVDALHNFN 178
            PD+  A  N +
Sbjct: 241 RPDYGAAHWNLS 252