Pairwise Alignments

Query, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

Subject, 509 a.a., tetratricopeptide repeat protein from Magnetospirillum magneticum AMB-1

 Score = 45.1 bits (105), Expect = 7e-09
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 435 IALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFLAKSEK--- 491
           +  +P N+ + +  GC    L    EA    ++A+  D SN  A+ NLA  L  + K   
Sbjct: 29  LTAHPDNARLWHLLGCARLQLGLAEEAIGHIRRAITFDASNPAAHANLARALLATGKPAG 88

Query: 492 YDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVK 534
             EAEE  ++AI   P   +    LA +  A +RY EAVA+++
Sbjct: 89  RIEAEESIRRAIMAQPADPSFHLTLAQLLQANRRYPEAVAELR 131



 Score = 31.6 bits (70), Expect = 8e-05
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 5/131 (3%)

Query: 404 DNNEFLEILSFANTLYESGDFEAAKTEYKKAIALNPGNSEVH-NHYGCLLEYLEKYG--E 460
           DN     +L  A    + G  E A    ++AI  +  N   H N    LL   +  G  E
Sbjct: 34  DNARLWHLLGCARL--QLGLAEEAIGHIRRAITFDASNPAAHANLARALLATGKPAGRIE 91

Query: 461 AEIEFKKAVALDGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMY 520
           AE   ++A+    ++   +  LA  L  + +Y EA    ++A ++AP +      LA+  
Sbjct: 92  AEESIRRAIMAQPADPSFHLTLAQLLQANRRYPEAVAELRQARDLAPGHPDIAATLASAL 151

Query: 521 AALKRYDEAVA 531
                 D+A+A
Sbjct: 152 HLAGDADQALA 162



 Score = 24.6 bits (52), Expect = 0.010
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 142 NMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHNFN 178
           N GN Y   G+ A A     +AV + PD  D L  FN
Sbjct: 180 NRGNAYLLKGEVAAARAALDQAVALAPD--DKLARFN 214