Pairwise Alignments
Query, 567 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2
Subject, 1339 a.a., Photosystem I assembly protein Ycf3 from Azospirillum sp. SherDot2
Score = 58.9 bits (141), Expect = 1e-12
Identities = 34/99 (34%), Positives = 54/99 (54%)
Query: 433 KAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFLAKSEKY 492
KA+ L PG ++ H + G +L+ L++ EAE ++A+ D + A+ NL LA +
Sbjct: 62 KAVDLAPGVADYHANLGIVLQRLDRLAEAEAAQRRALERDPGHVGAHFNLGLVLAAQGRL 121
Query: 493 DEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVA 531
EA + Y +A ++PD A NL A L R D+A+A
Sbjct: 122 AEAADQYAEAARLSPDLADAHLNLGAALQGLGRADDALA 160
Score = 46.2 bits (108), Expect = 8e-09
Identities = 30/104 (28%), Positives = 47/104 (45%)
Query: 413 SFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALD 472
+ N + +G A + A+AL P +E H + G L E++ EAE ++A+ L
Sbjct: 316 NLGNARHAAGRTADAWRAWHVAVALAPALAETHTNLGNALRSAERFTEAERSQRRAIRLA 375
Query: 473 GSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNL 516
S + NNL Y A + Y+ A+ + P Y A NL
Sbjct: 376 PLESPSRNNLGHLRQGRHDYAGAADCYRSALALDPAYGEAWSNL 419
Score = 44.7 bits (104), Expect = 2e-08
Identities = 29/103 (28%), Positives = 48/103 (46%)
Query: 413 SFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALD 472
+ N L + F A+ ++AI L P S N+ G L + Y A ++ A+ALD
Sbjct: 350 NLGNALRSAERFTEAERSQRRAIRLAPLESPSRNNLGHLRQGRHDYAGAADCYRSALALD 409
Query: 473 GSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYN 515
+ +A++NL + EAE Y +A+ + PD +N
Sbjct: 410 PAYGEAWSNLGLARQRLGDSGEAERCYDRALTLRPDLSLCHFN 452
Score = 42.7 bits (99), Expect = 9e-08
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 7/140 (5%)
Query: 413 SFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALD 472
+ A L+ +G E + Y A+ L P + N G L+ L + +A F A A+
Sbjct: 214 ALAAALHAAGRMEDSAERYADALRLEPRDPFCLNGLGLCLKALGQLDDAATCFDAATAIQ 273
Query: 473 GSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLA-AMYAALKRYDE--- 528
++ A +NL + + EAE +++A+ PD+ A NL A +AA + D
Sbjct: 274 PDHADALDNLGSVRIAQGRPAEAEALHRQAVHHRPDFAGAWNNLGNARHAAGRTADAWRA 333
Query: 529 ---AVAQVKSMVKIFRSDGN 545
AVA ++ + + GN
Sbjct: 334 WHVAVALAPALAETHTNLGN 353
Score = 42.7 bits (99), Expect = 9e-08
Identities = 30/123 (24%), Positives = 53/123 (43%)
Query: 417 TLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNS 476
TL G +AA ++ A+ LNP +E + G L+ EA ++ L +
Sbjct: 829 TLLRLGRIKAAIHWHRLAVTLNPAFAEALGNLGVALQADAAAPEAATLHRRTTRLRPMQA 888
Query: 477 KAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVKSM 536
+ + NLA L + ++ EA +A +AP + A L R+ EA Q +
Sbjct: 889 EGWGNLAAALLAARRFAEAANACTRAAALAPALAGVLTTAGAAAKGLGRFAEAARQSRRS 948
Query: 537 VKI 539
+++
Sbjct: 949 LRL 951
Score = 42.0 bits (97), Expect = 2e-07
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 414 FANTL--YESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVAL 471
FA L ++ G +AA+ Y++ + P +++ + G L +A KAV L
Sbjct: 7 FAEALRHHQDGALDAAEPLYRRVLQAEPLHADALHLLGVLNHQRNNNLQAVELIAKAVDL 66
Query: 472 DGSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVA 531
+ + NL L + ++ EAE ++A+E P + A +NL + AA R EA
Sbjct: 67 APGVADYHANLGIVLQRLDRLAEAEAAQRRALERDPGHVGAHFNLGLVLAAQGRLAEAAD 126
Query: 532 QVKSMVKI 539
Q ++
Sbjct: 127 QYAEAARL 134
Score = 38.1 bits (87), Expect = 2e-06
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 413 SFANTLYESGDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALD 472
+ A L + F A +A AL P + V G + L ++ EA + ++++ L
Sbjct: 893 NLAAALLAARRFAEAANACTRAAALAPALAGVLTTAGAAAKGLGRFAEAARQSRRSLRLV 952
Query: 473 GSNSKAYNNLATFLAKSEKYDEAEEHYKKAIEIAPD 508
++ K ++NL LA ++D+A ++ A+ +APD
Sbjct: 953 PASPKGWSNLGMALAGLGRWDDALYAHRHAMALAPD 988
Score = 35.4 bits (80), Expect = 1e-05
Identities = 34/152 (22%), Positives = 60/152 (39%), Gaps = 14/152 (9%)
Query: 380 ETLDELLDKSELESELVEEHTYEIDNNEFLEILSFANTLYESGDFEAAKTEYKKAIALNP 439
E D+ + + L +L + H L+ L G + A + +A L P
Sbjct: 123 EAADQYAEAARLSPDLADAH------------LNLGAALQGLGRADDALASHTRAADLLP 170
Query: 440 GNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGS--NSKAYNNLATFLAKSEKYDEAEE 497
G+ + L L + EA + A AL G ++ A + LA L + + +++ E
Sbjct: 171 GDPRPWTNRAVSLRQLGRLDEAVEALRMASALGGGAGDASALSALAAALHAAGRMEDSAE 230
Query: 498 HYKKAIEIAPDYWAAIYNLAAMYAALKRYDEA 529
Y A+ + P + L AL + D+A
Sbjct: 231 RYADALRLEPRDPFCLNGLGLCLKALGQLDDA 262
Score = 35.0 bits (79), Expect = 2e-05
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 427 AKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNNLATFL 486
A+ +++A+ P + N+ G + +A + AVAL + ++ + NL L
Sbjct: 296 AEALHRQAVHHRPDFAGAWNNLGNARHAAGRTADAWRAWHVAVALAPALAETHTNLGNAL 355
Query: 487 AKSEKYDEAEEHYKKAIEIAP 507
+E++ EAE ++AI +AP
Sbjct: 356 RSAERFTEAERSQRRAIRLAP 376
Score = 32.3 bits (72), Expect = 1e-04
Identities = 25/118 (21%), Positives = 52/118 (44%)
Query: 422 GDFEAAKTEYKKAIALNPGNSEVHNHYGCLLEYLEKYGEAEIEFKKAVALDGSNSKAYNN 481
G + A T + A A+ P +++ ++ G + + EAE ++AV + A+NN
Sbjct: 257 GQLDDAATCFDAATAIQPDHADALDNLGSVRIAQGRPAEAEALHRQAVHHRPDFAGAWNN 316
Query: 482 LATFLAKSEKYDEAEEHYKKAIEIAPDYWAAIYNLAAMYAALKRYDEAVAQVKSMVKI 539
L + + +A + A+ +AP NL + +R+ EA + +++
Sbjct: 317 LGNARHAAGRTADAWRAWHVAVALAPALAETHTNLGNALRSAERFTEAERSQRRAIRL 374
Score = 30.0 bits (66), Expect = 6e-04
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 105 SEFEDNYGLSKKVNDEVEKLKKMEKKGTDFVESQIS--FNMGNIYFNFGKYAEAIRCYKK 162
+++ N G+ + D + + + +++ + + FN+G + G+ AEA Y +
Sbjct: 71 ADYHANLGIVLQRLDRLAEAEAAQRRALERDPGHVGAHFNLGLVLAAQGRLAEAADQYAE 130
Query: 163 AVKIIPDFVDALHNFNS 179
A ++ PD DA N +
Sbjct: 131 AARLSPDLADAHLNLGA 147
Score = 29.3 bits (64), Expect = 0.001
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 135 VESQISFNMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHNFNSLSNMNLFDMGE 190
+ES N+G++ YA A CY+ A+ + P + +A N L+ L D GE
Sbjct: 377 LESPSRNNLGHLRQGRHDYAGAADCYRSALALDPAYGEAWSNL-GLARQRLGDSGE 431
Score = 26.9 bits (58), Expect = 0.005
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 151 GKYAEAIRCYKKAVKIIPDFVDALHNFNSL 180
G+ +A C+ A I PD DAL N S+
Sbjct: 257 GQLDDAATCFDAATAIQPDHADALDNLGSV 286
Score = 26.9 bits (58), Expect = 0.005
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 142 NMGNIYFNFGKYAEAIRCYKKAVKIIPDFVDALHNFNS 179
N+G++ G+ AEA +++AV PDF A +N +
Sbjct: 282 NLGSVRIAQGRPAEAEALHRQAVHHRPDFAGAWNNLGN 319