Pairwise Alignments

Query, 304 a.a., hydroxymethylbilane synthase from Methanococcus maripaludis S2

Subject, 313 a.a., hydroxymethylbilane synthase from Escherichia coli BL21

 Score =  146 bits (368), Expect = 7e-40
 Identities = 95/245 (38%), Positives = 134/245 (54%), Gaps = 4/245 (1%)

Query: 3   LRIGTRGSTLAMVQTEYIAGLL--NDLDIETEIIIVKTTGDKDQNKKLADLG-IGVFTKE 59
           LRI TR S LA+ Q  Y+   L  +   +  E++ + T GD   +  LA +G  G+F KE
Sbjct: 6   LRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKE 65

Query: 60  LDNKMLENEIDIAVHSLKDVPTLWSDELQITATPKRESPDDIIIWRKDCDFDIEHDELNV 119
           L+  +LEN  DIAVHS+KDVP  +   L +    +RE P D  +     + D       V
Sbjct: 66  LEVALLENRADIAVHSMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDNLDALPAGSIV 125

Query: 120 GTSSIRRTSFLQFTNPNLTPKLLRGNVATRINKLRNGEYDTIVMAKAGLIRQGIDLSEFN 179
           GTSS+RR   L    P+L  + LRGNV TR++KL NGEYD I++A AGL R G++     
Sbjct: 126 GTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLDNGEYDAIILAVAGLKRLGLESRIRA 185

Query: 180 YKKLDI-LPAPAQGVIGVASRKADAKINQILEKICDKKTYIEATAERWALKEYGGGCQAP 238
               +I LPA  QG +G+  R  D++  ++L  +   +T +  TAER       GGCQ P
Sbjct: 186 ALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEGGCQVP 245

Query: 239 FGAFA 243
            G++A
Sbjct: 246 IGSYA 250