Pairwise Alignments

Query, 397 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 421 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

 Score = 63.9 bits (154), Expect = 8e-15
 Identities = 73/301 (24%), Positives = 133/301 (44%), Gaps = 42/301 (13%)

Query: 111 SHYG-NVLVIEPSKFTHV-YSKTWGYEPYKGRWIEDSDKYSCMIGYALATNSFDREIDIG 168
           SH G  V+    S F H  Y +    E   GR    +D +  ++G  +A     +   +G
Sbjct: 106 SHRGYRVMGTNESYFEHYQYGRKQNLELASGRAFA-TDPFEVVLGAEVADALHYK---LG 161

Query: 169 DKITI------------NDKKYKVIGILEETGNP--RTENSVILSKDV------------ 202
           DK+ +            +DK + V+GIL+ TG P  RT +  +   +             
Sbjct: 162 DKLVLAHGVAVVSLVKHDDKPFTVVGILKRTGTPVDRTLHISLGGMEAIHIDWHNGVPAQ 221

Query: 203 GEELFEINNEYNM-----MIVSVRSGEDVNLVSEEIKDELEDSRGDENFSVLTAEQLAES 257
           G+     +   NM      I +   G +  + +  ++ E+ + RG+   ++L    L E 
Sbjct: 222 GKGRISADQARNMDLTPQAITAFMLGLNNKISTFALQREINEFRGEPMLAILPGVALQE- 280

Query: 258 INSIFEVLTIFLVGVAGISLLVGAVGISNTMHMSILERRKDIGILKALGAENTTILSIFV 317
           + S+       L  ++   +L G +G+   +  S+ ERR+++ IL+++GA    I ++ +
Sbjct: 281 LWSMMGTAEKALFVISLFVVLTGLIGMLTAILTSLNERRREMAILRSVGARPWHIATLLI 340

Query: 318 VEAGFLGLFGGIVGT-MLGILIAKAIEYIAAISGYGLIRAWIS---WELIVGVLVFSFVV 373
            EA  L L G + G  +L + IA +  Y+ A  G  L  +W S   W L+ G+L  + ++
Sbjct: 341 FEAFALALSGVVAGVGLLYVCIAASRGYLQANYGLDLPMSWPSEYEWTLLAGILAAALLM 400

Query: 374 G 374
           G
Sbjct: 401 G 401